Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120549.Seq
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q961L4 Cluster: GH18014p; n=9; Endopterygota|Rep: GH180...    38   0.27 
UniRef50_Q7RWT3 Cluster: Putative uncharacterized protein NCU004...    35   2.5  
UniRef50_A3I3A0 Cluster: Sensor protein; n=1; Algoriphagus sp. P...    33   7.8  
UniRef50_Q4Q6S6 Cluster: Putative uncharacterized protein; n=3; ...    33   7.8  

>UniRef50_Q961L4 Cluster: GH18014p; n=9; Endopterygota|Rep: GH18014p
           - Drosophila melanogaster (Fruit fly)
          Length = 434

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 375 NNVASGMTAYT-AELDKRTLKLTQLTPPVKPDHHRAPSTASSH 500
           +N+ S M+  T   L   +L LT + PP  PDHH   ST S+H
Sbjct: 10  HNLLSSMSGTTDTSLSLNSLSLTSVLPPTDPDHHNPHSTHSTH 52


>UniRef50_Q7RWT3 Cluster: Putative uncharacterized protein NCU00495.1;
            n=2; Sordariomycetes|Rep: Putative uncharacterized
            protein NCU00495.1 - Neurospora crassa
          Length = 1430

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = +1

Query: 523  SYKHNPRLCIYVPIWGID---LLSQWEHWFSCK*LRWHCDSQTCGS-NSEATPSHDGPQ 687
            +Y+H+  + + V + GI+   + S+WE+W + + LR  C+ +T G  N EAT S DG Q
Sbjct: 1332 TYRHDLLVAMRV-VNGIEREMIQSEWENWLADENLR--CEQETNGGDNEEATTSSDGEQ 1387


>UniRef50_A3I3A0 Cluster: Sensor protein; n=1; Algoriphagus sp.
           PR1|Rep: Sensor protein - Algoriphagus sp. PR1
          Length = 447

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 13  WTQLEDPLDERILNTLKAISILSGDTRGDLSGKYKHLVRISGDDM 147
           W  L   L   I+N++  IS L+G  +GD+  K   +  +S  DM
Sbjct: 221 WQNLVKILTHEIMNSIAPISSLAGTIKGDIESKMDEISPVSPSDM 265


>UniRef50_Q4Q6S6 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 370

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 630 TVPSELFARKPMFPLGQQVNTPNWDVYAQPGVMFI*SPTEAQGY 499
           TVP +  A++P FP G   N PN+  Y    +M        QGY
Sbjct: 302 TVPIQYMAQQPQFPTGMVYNAPNFFPYGATPMMMTQPQHIPQGY 345


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,463,456
Number of Sequences: 1657284
Number of extensions: 17952804
Number of successful extensions: 43815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43802
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)