Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120549.Seq
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing p...    32   2.6  
AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.                32   2.6  

>AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing
           protein protein.
          Length = 2386

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 533 CLYEAPLKLRGMTGGCRGGPVMVRLDWRCKLCQLEGSLIQFRCISSHTTG 384
           C   A    R   GGCRG    V  + RC+ C  +G L    C+ SH  G
Sbjct: 516 CFLFAAYLARYPHGGCRGWDDSVHSEPRCRSC--DGFLTCHECLQSHECG 563


>AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.
          Length = 2785

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 533  CLYEAPLKLRGMTGGCRGGPVMVRLDWRCKLCQLEGSLIQFRCISSHTTG 384
            C   A    R   GGCRG    V  + RC+ C  +G L    C+ SH  G
Sbjct: 915  CFLFAAYLARYPHGGCRGWDDSVHSEPRCRSC--DGFLTCHECLQSHECG 962


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,768,809
Number of Sequences: 237096
Number of extensions: 2781309
Number of successful extensions: 5330
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5330
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)