Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120549.Seq
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-2|AAN84846.1|  806|Caenorhabditis elegans Prion-like-(q/n...    30   1.6  
U97194-1|AAK68236.1|  788|Caenorhabditis elegans Prion-like-(q/n...    30   1.6  
AF170425-1|AAF89696.1|  788|Caenorhabditis elegans putative MAP-...    30   1.6  
Z75529-7|CAE54888.1|  382|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75529-6|CAA99785.1|  269|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93381-4|CAB07607.2|  382|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>U97194-2|AAN84846.1|  806|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
           isoform b protein.
          Length = 806

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 381 VASGMTAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPEL 512
           VA+ +     +  ++  KL QL PP  P    APS++S+  P +
Sbjct: 584 VANALAEKNKQQQQQQQKLNQLQPPHNPSLSTAPSSSSAQPPTM 627


>U97194-1|AAK68236.1|  788|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
           isoform a protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 381 VASGMTAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPEL 512
           VA+ +     +  ++  KL QL PP  P    APS++S+  P +
Sbjct: 566 VANALAEKNKQQQQQQQKLNQLQPPHNPSLSTAPSSSSAQPPTM 609


>AF170425-1|AAF89696.1|  788|Caenorhabditis elegans putative
           MAP-like protein protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 381 VASGMTAYTAELDKRTLKLTQLTPPVKPDHHRAPSTASSHTPEL 512
           VA+ +     +  ++  KL QL PP  P    APS++S+  P +
Sbjct: 566 VANALAEKNKQQQQQQQKLNQLQPPHNPSLSTAPSSSSAQPPTM 609


>Z75529-7|CAE54888.1|  382|Caenorhabditis elegans Hypothetical
           protein C44H9.7b protein.
          Length = 382

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 FLANNSDGTVIAKLVEVIRKPRPLTTVLNKNLSELINYVKANP 730
           F+ NNS G+    L     + R +TT LN    E+ N  KANP
Sbjct: 129 FITNNSSGSH-ELLEHCPNRSRTITTCLNNFQDEVTNMKKANP 170


>Z75529-6|CAA99785.1|  269|Caenorhabditis elegans Hypothetical
           protein C44H9.7a protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 FLANNSDGTVIAKLVEVIRKPRPLTTVLNKNLSELINYVKANP 730
           F+ NNS G+    L     + R +TT LN    E+ N  KANP
Sbjct: 129 FITNNSSGSH-ELLEHCPNRSRTITTCLNNFQDEVTNMKKANP 170


>Z93381-4|CAB07607.2|  382|Caenorhabditis elegans Hypothetical
           protein F28G4.4 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 735 IFGFALT*LISSDRFLLRTVVRGRGFRITSTSLAITVPSE 616
           IFGFAL  +  S+ F+ + V R + F  T  SL+  +P E
Sbjct: 17  IFGFALLVVRYSEVFIDKRVFRQKNFLETLNSLSDQIPFE 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,006
Number of Sequences: 27780
Number of extensions: 413805
Number of successful extensions: 1189
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)