Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120548.Seq
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   7.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 123  AASAHWQVLRLVLFSANRRRCSRLKMEFVKLQCNICFSVAEIKNILCNQ 269
            A+  HWQ + +++ S+       + +      C+ C+S  E KN+  N+
Sbjct: 1350 ASQIHWQKIIIIVMSSVTYGIDTVAV------CDACYSTIEEKNLQVNE 1392


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 691 SVFMQEKLDRIKNDYNNMHKSFKE 762
           + +  EK+ ++K +YN   K F+E
Sbjct: 179 TAYQNEKITKLKINYNPFAKGFRE 202


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 425 NVVDVIKCSVTSVAQWNKINDNFDA 499
           N++ VIK S   +  W  +  +FDA
Sbjct: 486 NLLSVIKSSFLDINTWKMLVKSFDA 510


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 392 SLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFD 496
           +L +    I R +  V    VTS   W  +ND+++
Sbjct: 238 ALAYRFGQITRRIAAVASEKVTSEKSWIALNDDYN 272


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 271 YWLHKIFLISATEKQMLHCNL 209
           YWLH+I  I       L CN+
Sbjct: 108 YWLHQICHICELHTIFLVCNV 128


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 295 YWYYSQSVYWLHKIFLI 245
           Y+YY+  ++ +H +FL+
Sbjct: 115 YFYYAFIIFTVHLLFLL 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,846
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)