BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120548.Seq (856 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 32 0.67 03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 31 1.5 01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 1.5 03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 30 2.0 10_01_0199 + 2164555-2165775 29 6.2 05_01_0535 - 4610339-4610707,4611910-4613049,4613342-4613419 29 6.2 >07_03_1576 - 27862043-27862129,27862935-27862988,27863042-27863243, 27865015-27865249,27865338-27865404,27865489-27865639, 27866898-27866957,27867402-27867466 Length = 306 Score = 31.9 bits (69), Expect = 0.67 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = +2 Query: 302 LDTCKHQLCSMCXXXXXXXXXXPCPLCR-----VESLHFNVYSINRNVVDV 439 L TC H +C C CP CR V S +Y+ NR++VD+ Sbjct: 178 LPTCSHAMCIKCYRDWRSRSQS-CPFCRDSLKRVNSADLWIYTDNRDIVDI 227 >03_06_0331 - 33181757-33181795,33182325-33182453,33182941-33182967, 33183459-33183545,33183827-33183975,33185467-33185521, 33185596-33187584,33188705-33188782 Length = 850 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +1 Query: 526 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQ 705 K L + +D N+ D + +++ A + + + D++ L K +N Q+ F + Sbjct: 44 KFTLKEIQDRWNSLLYDPEISTQASARMVEYENDLSTSNPLKAKV---INAKQKDLSFQK 100 Query: 706 EKLDRIKNDYNNMHK 750 K+D +KN Y M K Sbjct: 101 RKIDSVKNQYYAMRK 115 >01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793, 4211857-4212145 Length = 815 Score = 30.7 bits (66), Expect = 1.5 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = +1 Query: 571 SDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK 750 S + L++S++ + KL +++ E ++N L ++KLQ MQE L + ++ K Sbjct: 509 STEEALTDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSK 568 Query: 751 SFKE 762 + + Sbjct: 569 ALSD 572 >03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533, 27456774-27456872,27456948-27457012,27457476-27457575, 27458326-27458408,27458494-27458569,27458920-27459698 Length = 1515 Score = 30.3 bits (65), Expect = 2.0 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +1 Query: 502 LFASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQ-LNIKRQLDLNK 678 L A+ EKSL ++ E A N ++ LSE L++ +I + +Q Q L +L +N Sbjct: 624 LIATTEIEKSLREEKEKLLGALNEANSALSEKNCELRQSEIILHQQKQALEHLEELRVNM 683 Query: 679 LQQTSVFMQEKLDRIKNDYNNMH 747 + ++ E + +K D + H Sbjct: 684 ETEIKGYIDE-ICVLKRDLDATH 705 >10_01_0199 + 2164555-2165775 Length = 406 Score = 28.7 bits (61), Expect = 6.2 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -2 Query: 102 FALDIKSFRKKLFSELIIWYPKNSGTYVGYSSYP 1 F+LD+K+FR + + I+ +NS T + Y+S+P Sbjct: 366 FSLDLKTFRLERLCPMTIYQARNSPTEL-YTSFP 398 >05_01_0535 - 4610339-4610707,4611910-4613049,4613342-4613419 Length = 528 Score = 28.7 bits (61), Expect = 6.2 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = -1 Query: 292 WYYSQSVYWLHKIFLIS-ATEKQMLHCNLTNSIFRRLHLRLFAENNTRRRTC 140 WY+ Q+VY L F++S + ++ + NS RL L LF ++ R R C Sbjct: 196 WYHLQAVYELLLRFVMSPVVDVKIARKYMDNSFVSRL-LDLFDSDDPREREC 246 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,086,106 Number of Sequences: 37544 Number of extensions: 332478 Number of successful extensions: 1011 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1010 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2385713652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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