Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120548.Seq
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 34 0.11
AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical... 32 0.45
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.8
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 30 2.4
AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine r... 30 2.4
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 29 3.2
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.2
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 5.6
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical p... 28 9.7
Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical p... 28 9.7
U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein. 28 9.7
U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein. 28 9.7
U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein. 28 9.7
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQWNK 478
C H LC C CP CR E +N+ S+++N ++ +IK VT + K
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKI-VTKTTEVEK 86
Query: 479 INDNF 493
DNF
Sbjct: 87 NWDNF 91
>AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical
protein Y75B8A.28 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/81 (24%), Positives = 43/81 (53%)
Frame = +1
Query: 517 LFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSV 696
+++KSLL+ +D D +++E +KK ++D+A + N K + K+ Q V
Sbjct: 275 IWQKSLLERQKD-------DTLVVAEKLQNIKKRELDVATYNKDNKKEMAEREKVSQ--V 325
Query: 697 FMQEKLDRIKNDYNNMHKSFK 759
+ +R+K D+ +H +++
Sbjct: 326 TFATRHNRVKMDFETIHYNYE 346
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 523 EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQT 690
E+SLL++ + +++ N L+ES+ K + ++ E L L LNKLQ+
Sbjct: 432 ERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQEN 491
Query: 691 SVFMQEKL 714
S + EK+
Sbjct: 492 SKDLMEKI 499
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 523 EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQT 690
E+SLL++ + +++ N L+ES+ K + ++ E L L LNKLQ+
Sbjct: 434 ERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQEN 493
Query: 691 SVFMQEKL 714
S + EK+
Sbjct: 494 SKDLMEKI 501
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 523 EKSLLDDAE----DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQT 690
E+SLL++ + +++ N L+ES+ K + ++ E L L LNKLQ+
Sbjct: 434 ERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQEN 493
Query: 691 SVFMQEKL 714
S + EK+
Sbjct: 494 SKDLMEKI 501
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 266 PIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDV 439
PI + +I + C H+ C +C CP+CR + N+++ V+D+
Sbjct: 13 PICQCKMIVPTTIPACGHKFCFICLKGVYMNDMGGCPMCR-GPIDSNIFAQPSQVLDL 69
>AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 62 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 595 SQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNN 741
S AIL ++++A +++NIK++L L + V+ E + + N N+
Sbjct: 207 STAILASKKVEVASSSKMNIKKKLTKISLTYSVVYTAEVIWSVLNSLNS 255
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +2
Query: 308 TCKHQLCSMCXXXXXXXXXXPCPLC--RVESLHFN 406
TCKH +C+ C CP+C RV +H N
Sbjct: 41 TCKHSICAGCAGRWLSSCSV-CPMCRTRVREIHLN 74
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +2
Query: 311 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVI 442
C H C C CP C S N +S N+ +++V+
Sbjct: 158 CGHTYCESCIQVCKHQFQIKCPFCTTTSYQIN-FSTNKLILEVL 200
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 311 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQ 469
C H LC C CP CR E N+ S+++N ++ VIK ++ A+
Sbjct: 57 CCHTLCEGCIKKLLNYSRIVCPFCREPTEVPGNNIKSLHKNFSLIQVIKTTLVEEAE 113
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 311 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRN 427
C H +C C CP CR E+ +V S+ +N
Sbjct: 155 CGHSICQSCASKLAKNCVILCPFCRNETNVSSVASLPKN 193
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 302 LDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQ--WN 475
+ +C H LCS C CP+C+ + Y R +V+ K + T + + WN
Sbjct: 51 VSSCNHSLCSQC-----FDKFTECPICKEPLVRSENYQA-RKIVEHFKENPTMIIEKWWN 104
Query: 476 KINDNFDAAS 505
+ + S
Sbjct: 105 STANGSETCS 114
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 538 DDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLD 717
D+ E+ NS+ + + + ++KLQ D + +L + D+ L++ QE L+
Sbjct: 179 DEIEELKKKVNSESSRATLADEAVQKLQTD---KDKLEEEYMNDMRDLKKALKDNQEGLE 235
Query: 718 RIKNDYNNMHKSFKE 762
+I D N +E
Sbjct: 236 KIAKDVKNKEGEIEE 250
>Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical
protein C01G10.11a protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 CRLFASVLFEKSLLDDAEDSNNAANSDDTMLSESQ 600
C+ A+ L SL DDA + NSDD L Q
Sbjct: 119 CKKMAAALDSDSLKDDASTRRSMTNSDDEDLLRQQ 153
>Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical
protein C01G10.11b protein.
Length = 369
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 CRLFASVLFEKSLLDDAEDSNNAANSDDTMLSESQ 600
C+ A+ L SL DDA + NSDD L Q
Sbjct: 119 CKKMAAALDSDSLKDDASTRRSMTNSDDEDLLRQQ 153
>U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein.
Length = 376
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 CRLFASVLFEKSLLDDAEDSNNAANSDDTMLSESQ 600
C+ A+ L SL DDA + NSDD L Q
Sbjct: 126 CKKMAAALDSDSLKDDASTRRSMTNSDDEDLLRQQ 160
>U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein.
Length = 379
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 CRLFASVLFEKSLLDDAEDSNNAANSDDTMLSESQ 600
C+ A+ L SL DDA + NSDD L Q
Sbjct: 120 CKKMAAALDSDSLKDDASTRRSMTNSDDEDLLRQQ 154
>U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein.
Length = 385
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 CRLFASVLFEKSLLDDAEDSNNAANSDDTMLSESQ 600
C+ A+ L SL DDA + NSDD L Q
Sbjct: 126 CKKMAAALDSDSLKDDASTRRSMTNSDDEDLLRQQ 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,325,817
Number of Sequences: 27780
Number of extensions: 326941
Number of successful extensions: 993
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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