Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120547.Seq
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41667 Cluster: Uncharacterized 49.3 kDa protein in HE6...   184   2e-45
UniRef50_O10353 Cluster: Uncharacterized 48.2 kDa protein; n=8; ...    87   4e-16
UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n...    35   1.7  
UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1...    34   4.0  
UniRef50_Q5BN18 Cluster: Gag protein; n=2; Drosophila melanogast...    34   4.0  
UniRef50_Q5T9G1 Cluster: OTTHUMP00000016273; n=5; Eutheria|Rep: ...    33   6.9  
UniRef50_A2QTM6 Cluster: Contig An09c0070, complete genome; n=1;...    33   6.9  

>UniRef50_P41667 Cluster: Uncharacterized 49.3 kDa protein in
           HE65-PK2 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 49.3 kDa
           protein in HE65-PK2 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 424

 Score =  184 bits (448), Expect = 2e-45
 Identities = 89/100 (89%), Positives = 93/100 (93%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   PSRLGNVMFVNSLIDKPITRETIVDIINSYHNACQNLKRSGHRVVGDYRAYERDYKLAAL 181
           PSRLGNVMFVNSLIDKPITRETIV+IINSYHNACQNLKRSGHRVVGDYRAYERDYKLAAL
Sbjct: 298 PSRLGNVMFVNSLIDKPITRETIVNIINSYHNACQNLKRSGHRVVGDYRAYERDYKLAAL 357

Query: 182 DFIILMLVTSITHRTLKYNMLNIHEKCFKN*KR-LCANTA 298
           DFIILMLVTSITHRTLKYNMLNIHEK F+  K  +C + A
Sbjct: 358 DFIILMLVTSITHRTLKYNMLNIHEKMFQELKTVVCKHNA 397



 Score = 91.9 bits (218), Expect = 1e-17
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +1

Query: 256 KMFQELKTIVCKHSAAKLYDILINYDINKEPLNNFRYNYEVL 381
           KMFQELKT+VCKH+AAKLYDILINYDINKEPLNNFRYNYEVL
Sbjct: 383 KMFQELKTVVCKHNAAKLYDILINYDINKEPLNNFRYNYEVL 424


>UniRef50_O10353 Cluster: Uncharacterized 48.2 kDa protein; n=8;
           Nucleopolyhedrovirus|Rep: Uncharacterized 48.2 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 424

 Score = 87.0 bits (206), Expect = 4e-16
 Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = +2

Query: 8   RLGNVMFVNSLIDKPITRETIVDIINSYHNACQNLKRSGH-RVVGDYRAYERDYKLAALD 184
           +LGNV+FVN++  +   +ETI+  + +Y+ AC+  K +   RV+G+Y+ Y  DYKLAALD
Sbjct: 298 KLGNVLFVNTM--RTGAKETIIATMRAYYYACKYAKANKLLRVIGNYKGYANDYKLAALD 355

Query: 185 FIILMLVTSITHRTLKYNMLNIHEKCFKN*KRLCANTAP 301
           F ILMLVT+ T+  LKY  +N+HE+ F   K+     +P
Sbjct: 356 FAILMLVTNSTNIQLKYLTMNVHERMFMELKQQVCRLSP 394



 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +1

Query: 256 KMFQELKTIVCKHSAAKLYDILINYDINKEPLNNF 360
           +MF ELK  VC+ S  K+Y++L+NYDI  EPL NF
Sbjct: 380 RMFMELKQQVCRLSPRKIYNVLLNYDIGSEPLTNF 414


>UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000DBFFED UniRef100 entry -
           Rattus norvegicus
          Length = 280

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 393 YT*NSTRKASLYNDI-IFTQTYESYI-NHVY*LAQTNESYIIVFINLQKPSSMNYVINHV 566
           +T   T+   +Y  I I+T T+  YI  H+Y    T+  YI   I +   +   Y+  H+
Sbjct: 176 HTHTHTQYIYIYTHIYIYTHTHTIYIYTHIYIYTHTHNIYIYTHIYIYIHTHTQYIYIHI 235

Query: 567 Y*LAPTMSHT 596
           Y    T +HT
Sbjct: 236 YIYTHTHTHT 245


>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
          Length = 4894

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +1

Query: 187  YYFDARHQHYTSHFEIQHAKHTRKMFQELKTIVCKHSAAKLYDILINYDINKEPLNNFRY 366
            YY +  + +Y S   IQ+  H  K     K    K+   K YDI+IN    +E +NN+ +
Sbjct: 4658 YYHNKYNHNYISSVYIQYL-HFLKYKNTHKNNYSKNQRTKEYDIIINNKKTEENVNNYNH 4716

Query: 367  NYEV 378
            +  +
Sbjct: 4717 SINI 4720


>UniRef50_Q5BN18 Cluster: Gag protein; n=2; Drosophila
           melanogaster|Rep: Gag protein - Drosophila melanogaster
           (Fruit fly)
          Length = 377

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 560 SRLLTCTNNESYTNHVYQLAKIKFNELCLNMFINSHKQMSHTLI 691
           S+L +   N  + N V    K+ +NE+CLN F+   K+   T +
Sbjct: 200 SQLFSILKNSEHNNTVVDAKKVVYNEVCLNAFMTGLKEPLKTFV 243


>UniRef50_Q5T9G1 Cluster: OTTHUMP00000016273; n=5; Eutheria|Rep:
           OTTHUMP00000016273 - Homo sapiens (Human)
          Length = 113

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 LAALDFIILMLVTSITHRTLKYNMLNIHEKCFKN--*KRLCANTAPPNCTTY 319
           L  L F  L L+T  +    KYN+L + E C +N   +  C   AP NC ++
Sbjct: 1   LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESH 52


>UniRef50_A2QTM6 Cluster: Contig An09c0070, complete genome; n=1;
           Aspergillus niger|Rep: Contig An09c0070, complete genome
           - Aspergillus niger
          Length = 545

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 47  KPITRETIVDIINSYHNACQNLKRSGHRVVG 139
           +P  R++I+  + SYH   QNL R GH+V G
Sbjct: 37  RPNGRDSIIPTLVSYHPHTQNLHRWGHKVAG 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,361,449
Number of Sequences: 1657284
Number of extensions: 12826223
Number of successful extensions: 28033
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28009
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)