Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120547.Seq
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.5  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 279 DCVQTQRRQTVRHINQLRH 335
           DCV+++  + V++  +LRH
Sbjct: 258 DCVRSEASKVVKNAQKLRH 276


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 LTGVMVRIDNIHYSFSCYRF 47
           +TG+ V + NI  ++ CY F
Sbjct: 129 MTGIWVWLINISATYICYAF 148


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 LTGVMVRIDNIHYSFSCYRF 47
           +TG+ V + NI  ++ CY F
Sbjct: 362 MTGIWVWLINISATYICYAF 381


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 LTGVMVRIDNIHYSFSCYRF 47
           +TG+ V + NI  ++ CY F
Sbjct: 362 MTGIWVWLINISATYICYAF 381


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 143 NRQQLCGQIFLDFDRR 96
           N  +LC Q+FL+ +RR
Sbjct: 202 NAVRLCFQVFLEGERR 217


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 307 VWRRCVCTQSFLILETFFVYV*HVVF 230
           +W+    TQ F+  E FFV +  + F
Sbjct: 123 IWKSYKRTQIFITCELFFVILLWISF 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,119
Number of Sequences: 336
Number of extensions: 3846
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)