Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120547.Seq
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150544-1|AAI50545.1|  121|Homo sapiens LOC340204 protein protein.    33   1.0  
BC150543-1|AAI50544.1|  121|Homo sapiens LOC340204 protein protein.    33   1.0  
BC133046-1|AAI33047.1|  121|Homo sapiens hypothetical protein LO...    33   1.0  
AL157823-5|CAI21640.1|  113|Homo sapiens protein ( Human DNA seq...    33   1.0  

>BC150544-1|AAI50545.1|  121|Homo sapiens LOC340204 protein protein.
          Length = 121

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 LAALDFIILMLVTSITHRTLKYNMLNIHEKCFKN--*KRLCANTAPPNCTTY 319
           L  L F  L L+T  +    KYN+L + E C +N   +  C   AP NC ++
Sbjct: 9   LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESH 60


>BC150543-1|AAI50544.1|  121|Homo sapiens LOC340204 protein protein.
          Length = 121

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 LAALDFIILMLVTSITHRTLKYNMLNIHEKCFKN--*KRLCANTAPPNCTTY 319
           L  L F  L L+T  +    KYN+L + E C +N   +  C   AP NC ++
Sbjct: 9   LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESH 60


>BC133046-1|AAI33047.1|  121|Homo sapiens hypothetical protein
           LOC340204 protein.
          Length = 121

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 LAALDFIILMLVTSITHRTLKYNMLNIHEKCFKN--*KRLCANTAPPNCTTY 319
           L  L F  L L+T  +    KYN+L + E C +N   +  C   AP NC ++
Sbjct: 9   LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESH 60


>AL157823-5|CAI21640.1|  113|Homo sapiens protein ( Human DNA
           sequence from clone RP3-510O8 on chromosome 6 Contains
           the5' end of the FKBP5 gene for FK506 binding protein 5
           (FKBP51), four ).
          Length = 113

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 LAALDFIILMLVTSITHRTLKYNMLNIHEKCFKN--*KRLCANTAPPNCTTY 319
           L  L F  L L+T  +    KYN+L + E C +N   +  C   AP NC ++
Sbjct: 1   LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESH 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,256,207
Number of Sequences: 237096
Number of extensions: 1852595
Number of successful extensions: 2837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2837
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)