Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120546X.Seq
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39175| Best HMM Match : DUF1378 (HMM E-Value=8) 30 1.6
SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20) 29 3.7
SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13) 28 4.8
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 4.8
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 27 8.5
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 27 8.5
SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09) 27 8.5
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 27 8.5
SB_53612| Best HMM Match : SRCR (HMM E-Value=0) 27 8.5
SB_39413| Best HMM Match : GED (HMM E-Value=0.81) 27 8.5
SB_30431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8) 27 8.5
SB_1884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_39175| Best HMM Match : DUF1378 (HMM E-Value=8)
Length = 282
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 449 ITTLP*RLSTRRETRASSSQARSAHP 526
ITT+P RL+ RRE +S SAHP
Sbjct: 145 ITTIPSRLTYRREDNTRASSQCSAHP 170
>SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20)
Length = 637
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 362 SQSKGNIWGHIANCIGSSIFNRNLFISKYNAIALIVPTTHTYS 234
S KG ++ N +GS+I R+L I L+ T+ TYS
Sbjct: 128 SGDKGTYTCNVTNRLGSAIATRDLLIGNVRITFLLKITSETYS 170
>SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13)
Length = 360
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 10 NTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 174
NT+ + A L++ND+T K + L TQ + + + + KI+ + +ET
Sbjct: 296 NTSTNLKANKLMVNDLTGEKLQHKNTLLTQELQIIDQQLEHKIRDLKIEKDNLET 350
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 10 NTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 174
NT+ + A L++ND+T K + L TQ + + + + KI+ + +ET
Sbjct: 244 NTSTNLKANKLMVNDLTGEKLQHKNTLLTQELQIIDQQLEHKIRDLKIEKDNLET 298
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = -3
Query: 278 YNAIALIVPTTHTYSVTITWIVLS*TLPKKSNTLTVSILFNLILVSLACIGSNRLRAPTD 99
Y AI + VP T + V ++WIV + N LTV I L +V L ++ L +D
Sbjct: 271 YYAIQMYVPCT--FLVMLSWIVFWMNPEETGNRLTVGITTILTIVFLLGYTNSTLPKVSD 328
Query: 98 *VD 90
D
Sbjct: 329 NTD 331
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 312 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 358
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 37 SLLINDITPNKTESLKILSTQSVGARNLLEPMQ 135
S LI+D+TP T ++ + S+G EP +
Sbjct: 1027 STLIDDLTPGATYQFRVSANNSIGISRPSEPFE 1059
>SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09)
Length = 720
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = -3
Query: 368 CSSQSKGNIWGHIANCIGSSIFNRNLFISKYNAIALIVPTT 246
C+ GN+WGH + +++ L+++ + A++ P+T
Sbjct: 660 CTEWGMGNMWGHSSKITDDRLYDDALYMANHR-WAILPPST 699
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 177 QRVRLFGERLRQHDPSDSYRVSVRRRHDERYRVVFGNKQIAVKNRRA 317
+R+R+ ER R+ D +R DER RV +++ + RRA
Sbjct: 421 ERLRVEAERQREEDERQRAEDERQRAEDERQRVKHEMQRLKDERRRA 467
>SB_53612| Best HMM Match : SRCR (HMM E-Value=0)
Length = 409
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 461 P*RLSTRRETRASSSQARSAHPTP 532
P R TR+ ASSSQ S HP P
Sbjct: 379 PKRKRTRQANSASSSQPSSPHPAP 402
>SB_39413| Best HMM Match : GED (HMM E-Value=0.81)
Length = 300
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_30431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8)
Length = 520
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 325 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 371
>SB_1884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 198 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 55
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,508,770
Number of Sequences: 59808
Number of extensions: 310400
Number of successful extensions: 821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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