Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120546X.Seq
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075303-1|AAL68170.1|  334|Drosophila melanogaster AT31457p pro...    31   0.86 
AE013599-1616|AAF58439.2|  334|Drosophila melanogaster CG13322-P...    31   0.86 
AE013599-1615|AAM68619.1|  334|Drosophila melanogaster CG13322-P...    31   0.86 
AE013599-1614|AAM68618.1|  334|Drosophila melanogaster CG13322-P...    31   0.86 
BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p pro...    30   2.0  
AE014296-3326|AAF49032.3|  362|Drosophila melanogaster CG6663-PA...    29   6.1  

>AY075303-1|AAL68170.1|  334|Drosophila melanogaster AT31457p
           protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 10  NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 177
           N+ A QTA SL        I PN  E   + + + + +R  L+P +AN    K N  +++
Sbjct: 29  NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88

Query: 178 NVLDFLGSVYDNTIQVIVTE 237
            +L+       + I   V E
Sbjct: 89  GLLNGSAPTMSDIITTAVQE 108


>AE013599-1616|AAF58439.2|  334|Drosophila melanogaster CG13322-PC,
           isoform C protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 10  NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 177
           N+ A QTA SL        I PN  E   + + + + +R  L+P +AN    K N  +++
Sbjct: 29  NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88

Query: 178 NVLDFLGSVYDNTIQVIVTE 237
            +L+       + I   V E
Sbjct: 89  GLLNGSAPTMSDIITTAVQE 108


>AE013599-1615|AAM68619.1|  334|Drosophila melanogaster CG13322-PB,
           isoform B protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 10  NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 177
           N+ A QTA SL        I PN  E   + + + + +R  L+P +AN    K N  +++
Sbjct: 29  NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88

Query: 178 NVLDFLGSVYDNTIQVIVTE 237
            +L+       + I   V E
Sbjct: 89  GLLNGSAPTMSDIITTAVQE 108


>AE013599-1614|AAM68618.1|  334|Drosophila melanogaster CG13322-PA,
           isoform A protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 10  NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 177
           N+ A QTA SL        I PN  E   + + + + +R  L+P +AN    K N  +++
Sbjct: 29  NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88

Query: 178 NVLDFLGSVYDNTIQVIVTE 237
            +L+       + I   V E
Sbjct: 89  GLLNGSAPTMSDIITTAVQE 108


>BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p
           protein.
          Length = 764

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = -3

Query: 383 NCTF*CSSQSKGNIWGHIANCIGSSIFNRNLFISKYNAIALIVPTTHTYSVTITWIVLS* 204
           NC+F   ++S  +I+G I N   S + N  L +S YN I  I+  +    V  +  ++S 
Sbjct: 399 NCSFNIKNESHSSIYGIIKNHKLSGVPNSGLNLSDYN-IPSILNCSAFKPVVASTAIVST 457

Query: 203 TLPKKSNTLT 174
           +L  +SN  T
Sbjct: 458 SLYTRSNEST 467


>AE014296-3326|AAF49032.3|  362|Drosophila melanogaster CG6663-PA
           protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +1

Query: 76  SLKILSTQSVGARNLLEPMQA--NET--KIKLNRIETVNVLDFLGSVYD 210
           +L +   +++G   LLE ++A  NET  ++KL + +T +VL    +VYD
Sbjct: 225 NLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDTVYD 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,768,063
Number of Sequences: 53049
Number of extensions: 459665
Number of successful extensions: 1422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)