Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120545.Seq
         (716 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356526-1|AAK37564.1| 1151|Homo sapiens sorbin and SH3 domain c...    32   1.8  
AL158165-5|CAI14381.1| 1151|Homo sapiens sorbin and SH3 domain c...    30   7.2  

>AF356526-1|AAK37564.1| 1151|Homo sapiens sorbin and SH3 domain
           containing 1 protein.
          Length = 1151

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = +1

Query: 37  CSKRVVKRCVVGHIYNQFPPR*RTVLWRHFDFVAIQYLPSYRFPHIDNNSNMATKRFFSG 216
           CS  V+ RC +  + +  PP   + +    D  +  Y P Y F   D  S ++  R  S 
Sbjct: 446 CSGTVISRCGLKLLDSSDPPTSASQVAGTADDDSDLYSPRYSFSE-DTKSPLSVPRSKSE 504

Query: 217 ES--SGEPLIKRMAMLIAPRRLEKITKELMVN*W 312
            S   GE ++KR A L  P R   +      N W
Sbjct: 505 MSYIDGEKVVKRSATLPLPARSSSLKSSSERNDW 538


>AL158165-5|CAI14381.1| 1151|Homo sapiens sorbin and SH3 domain
           containing 1 protein.
          Length = 1151

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
 Frame = +1

Query: 37  CSKRVVKRCVVGHIYNQFPPR*RTVLWRHFDFVAIQYLPSYRFPHIDNNSNMATKRFFSG 216
           CS  V+  C +  + +  PP   + +    D  +  Y P Y F   D  S ++  R  S 
Sbjct: 446 CSGTVIAHCSLKLLDSSNPPTSASQVAGTADDDSDLYSPRYSFSE-DTKSPLSVPRSKSE 504

Query: 217 ES--SGEPLIKRMAMLIAPRRLEKITKELMVN*W 312
            S   GE ++KR A L  P R   +      N W
Sbjct: 505 MSYIDGEKVVKRSATLPLPARSSSLKSSSERNDW 538


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,636,271
Number of Sequences: 237096
Number of extensions: 1776478
Number of successful extensions: 4154
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4154
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)