Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120544.Seq
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 129 NNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 25
           NNG +K  L  + + HN+  +T   H+EI    S+
Sbjct: 209 NNGHYKNFLSQVEIIHNEILVT---HNEIQTIFSV 240


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 129 NNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 25
           NNG +K  L  + + HN+  +T   H+EI    S+
Sbjct: 34  NNGHYKNFLSQVEIIHNEILVT---HNEIQTIFSV 65


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 575 FNHRMFNINYENKTKYTD*NKF 510
           FN   FN NY+    Y++ N +
Sbjct: 206 FNDPQFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 575 FNHRMFNINYENKTKYTD*NKF 510
           FN   FN NY+    Y++ N +
Sbjct: 226 FNDPQFNFNYQYNQAYSNYNNY 247


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 254 YFTRPGKKGRDAKSL*CCWRSSSDGHT 174
           +F   G  GRD +++   W S+  G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 254 YFTRPGKKGRDAKSL*CCWRSSSDGHT 174
           +F   G  GRD +++   W S+  G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 254 YFTRPGKKGRDAKSL*CCWRSSSDGHT 174
           +F   G  GRD +++   W S+  G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 472 WAGHLQMKTGFM 507
           WA HLQ  T FM
Sbjct: 409 WAQHLQKTTTFM 420


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 79  IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWP 183
           I   P+ ++  L+ +  E FEK GF  + + + +P
Sbjct: 115 IAASPE-LRANLIASSFEYFEKYGFNGLDIDWEYP 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,241
Number of Sequences: 336
Number of extensions: 3234
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)