Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120543.Seq
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12826 Cluster: Early 18.5 kDa protein; n=13; Nucleopol... 170 3e-41
UniRef50_Q2NP63 Cluster: ORF135 peptide; n=2; Nucleopolyhedrovir... 93 5e-18
UniRef50_Q9Q3Y0 Cluster: AcORF17 homolog; n=1; Amsacta albistrig... 75 1e-12
UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5; Nucleopoly... 59 9e-08
UniRef50_Q77SB2 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q6X857 Cluster: ORF-B; n=2; Spodoptera frugiperda MNPV|... 39 0.11
UniRef50_Q8JMB6 Cluster: Putative uncharacterized protein; n=2; ... 38 0.19
UniRef50_Q287P2 Cluster: ORF-30; n=1; Agrotis segetum nucleopoly... 38 0.19
UniRef50_Q80LH6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_Q0IKX7 Cluster: ORF142; n=1; Leucania separata nuclear ... 37 0.57
UniRef50_Q0N3X6 Cluster: Se29-like protein; n=1; Clanis bilineat... 36 0.75
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 34 4.0
UniRef50_Q23KI2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q2HQT3 Cluster: DeoR-like protein; n=1; Cystobacter fus... 33 9.2
UniRef50_Q4N9I8 Cluster: DNA-directed RNA polymerase, alpha subu... 33 9.2
UniRef50_Q1DYZ9 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.2
>UniRef50_P12826 Cluster: Early 18.5 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Early 18.5 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 164
Score = 170 bits (414), Expect = 3e-41
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +3
Query: 255 CSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIE 434
CSISDSVTIVNK NEKHV FDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKD+V+SI+
Sbjct: 68 CSISDSVTIVNKSNEKHVTFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDVVDSIQ 127
Query: 435 NQQTMLKVFINEANVYNKWNMLKG 506
NQQTMLKVFINEANVYNKWNMLKG
Sbjct: 128 NQQTMLKVFINEANVYNKWNMLKG 151
Score = 137 bits (332), Expect = 2e-31
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1
Query: 55 MNLKVILTLINLKGEEEPNCVERITIMPCSLMDTEICLNVRCRSPFAKFKVLIIVDGFDS 234
MNLKVILT INLKGEEEPNCVERITIMPC L+DTEICLNVRCRSPFAKFKVLIIVDGFDS
Sbjct: 1 MNLKVILTPINLKGEEEPNCVERITIMPCILIDTEICLNVRCRSPFAKFKVLIIVDGFDS 60
Query: 235 AYIQATFVALA 267
AYIQATF +++
Sbjct: 61 AYIQATFCSIS 71
>UniRef50_Q2NP63 Cluster: ORF135 peptide; n=2;
Nucleopolyhedrovirus|Rep: ORF135 peptide - Hyphantria
cunea nuclear polyhedrosis virus (HcNPV)
Length = 209
Score = 93.5 bits (222), Expect = 5e-18
Identities = 40/85 (47%), Positives = 63/85 (74%)
Frame = +3
Query: 252 LCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSI 431
+CS D+V +VN +++ ++FDGF +PDDEG T+P+++GPL++V A R+V+ VN+I
Sbjct: 66 VCSRYDAVCVVNTPDQREIVFDGFAKPDDEGVTVPFLVGPLFAVRHA-GRRQVRLAVNAI 124
Query: 432 ENQQTMLKVFINEANVYNKWNMLKG 506
E Q+TMLK+F+NEA + W L+G
Sbjct: 125 ERQETMLKMFVNEAYIKTAWGALRG 149
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +1
Query: 55 MNLKVILTLINLKGEEEPNCVERITIMPCSLMDTEICLNVRCRSPFAKFKVLIIVDGFDS 234
M++ V L INLKG EEP ER ++ P D E CL V+CRSPFAKFKVLI + F
Sbjct: 1 MDITVTLVPINLKGVEEPKRSERFSLTPVCA-DAEFCLTVKCRSPFAKFKVLISITNFAE 59
Query: 235 AYIQAT 252
++QAT
Sbjct: 60 KHLQAT 65
>UniRef50_Q9Q3Y0 Cluster: AcORF17 homolog; n=1; Amsacta albistriga
nucleopolyhedrovirus|Rep: AcORF17 homolog - Amsacta
albistriga nucleopolyhedrovirus
Length = 267
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Frame = +3
Query: 255 CSISDSVTIVN-KFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAA-----VADRKVKD 416
C+ +D+V IVN +++++ FDGF++ DDEG T+P+V+GPLYS++ +RKV D
Sbjct: 79 CNGNDTVAIVNCDKHQRYIYFDGFIKMDDEGATVPFVVGPLYSINIENNNNNNGNRKVCD 138
Query: 417 MVNSIENQQTMLKVFINEA 473
+V IE+QQT LK+FI A
Sbjct: 139 IVKLIESQQTPLKIFIKHA 157
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +1
Query: 142 SLMDTEICLNVRCRSPFAKFKVLIIVDGFDSAYIQATF 255
SL EICLNV+C SPF KFK+ I++D FD +QATF
Sbjct: 41 SLSSREICLNVKCPSPFVKFKMSILIDQFDEDCVQATF 78
>UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 25.9 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 225
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 NPDEIASGKRLIIKHLQDESQSDINAY 83
NPDEIASGKRLIIKHLQDESQSDINAY
Sbjct: 199 NPDEIASGKRLIIKHLQDESQSDINAY 225
>UniRef50_Q77SB2 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 251
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = +3
Query: 273 VTIVNKFNEKH-VMFDGFVRPDDEGTTMPYVIGPLYSV-DAAVADRKVKDMVNSIENQQT 446
V IVN N +FDGF+ DE T+P+ + PL + + A+ KV++M ++E +
Sbjct: 77 VCIVNALNSNMPCVFDGFIDETDETKTVPFCVTPLNEIRNDAIGLLKVREMAKAME-RAA 135
Query: 447 MLKVFINEA----NVYNKW 491
+L+++INEA NV KW
Sbjct: 136 ILRMYINEAIVCENVSRKW 154
>UniRef50_Q6X857 Cluster: ORF-B; n=2; Spodoptera frugiperda
MNPV|Rep: ORF-B - Spodoptera frugiperda nuclear
polyhedrosis virus (SfNPV)
Length = 216
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 279 IVNKFNEKHVMFDGFVRP-DDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQTMLK 455
IVN+ +K ++FDGFV +DE T + +G L ++ + V++M ++E+ T+L
Sbjct: 79 IVNRSRDKPILFDGFVNEFEDECKTKSFNVGNLKELN-ELHGLCVREMARAMES-PTVLH 136
Query: 456 VFINEA 473
V++NEA
Sbjct: 137 VYVNEA 142
>UniRef50_Q8JMB6 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 213
Score = 38.3 bits (85), Expect = 0.19
Identities = 24/74 (32%), Positives = 44/74 (59%)
Frame = +3
Query: 267 DSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQT 446
+S+ IVN ++ V+FDGFV +DE T ++I + +V++M ++E+ T
Sbjct: 68 ESMCIVNT-PKQPVIFDGFVDIEDESRTNAFLIKNNLNALKPDHGLRVREMARAMES-PT 125
Query: 447 MLKVFINEANVYNK 488
+L++F+NEA N+
Sbjct: 126 VLQIFVNEAIFANE 139
>UniRef50_Q287P2 Cluster: ORF-30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: ORF-30 - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 214
Score = 38.3 bits (85), Expect = 0.19
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 279 IVNKFNEKHVM-FDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQTMLK 455
+VN +++ + FDGF +DEG T + +G L + R V++M +E+ T+L+
Sbjct: 67 VVNARDKRQALVFDGFPDTEDEGRTTTFAVGTLKELRDNHGLR-VREMARVMES-PTILE 124
Query: 456 VFINEA 473
VFINEA
Sbjct: 125 VFINEA 130
>UniRef50_Q80LH6 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 220
Score = 37.9 bits (84), Expect = 0.25
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +3
Query: 273 VTIVNKFNEKH--VMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQT 446
V+IVN KH ++FDGF P+DE T P++ + V DM ++E T
Sbjct: 70 VSIVNA-RAKHDKIVFDGFANPEDEAKTCPFIFSRFKQLKEN-HRLNVVDMAKNMEG-AT 126
Query: 447 MLKVFINEA----NVYNKW 491
++ V++NEA ++ +KW
Sbjct: 127 VVYVYLNEAIMAESLLSKW 145
>UniRef50_Q0IKX7 Cluster: ORF142; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF142 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 250
Score = 36.7 bits (81), Expect = 0.57
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +3
Query: 264 SDSVTIVNKFNEKH-VMFDGFVRPDDEGTTMPYVIGPLYSV--DAAVADRKVKDMVNSIE 434
S +T+VN N++ ++FDGF+ D+ T P+V+ +Y + D + R+ M ++
Sbjct: 69 SKHLTVVNVKNKRDPLIFDGFMDELDDAKTKPFVVYHMYGLRDDHRLNSRQ---MAQAMG 125
Query: 435 NQQTMLKVFINEA--NVYNKW 491
N L +F+NEA NV KW
Sbjct: 126 N-APKLTLFLNEAIMNVKEKW 145
>UniRef50_Q0N3X6 Cluster: Se29-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Se29-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 243
Score = 36.3 bits (80), Expect = 0.75
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 SVTIVNKFNEKH-VMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQT 446
+V+++N ++ ++FDGF+ +DE T+P+ + + ++ VK M S+ +T
Sbjct: 74 NVSLINALDKNFPIIFDGFMCENDESLTVPFNVSRVRAL-RPECKLNVKKMA-SVMGSET 131
Query: 447 MLKVFINEA 473
+LK++++EA
Sbjct: 132 LLKMYLHEA 140
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 33.9 bits (74), Expect = 4.0
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 FDGFVRPDDEGTTMPYVIGPLYS-VDAAVADRKVKDMVNSIENQQTMLKVFINEA 473
FDGF DDE T P+V+ L S + D + K + + N LK+FINEA
Sbjct: 88 FDGFPSEDDESQTTPFVLALLKSALSQENLDVRTKAKLMTGSNS---LKIFINEA 139
>UniRef50_Q23KI2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 973
Score = 33.5 bits (73), Expect = 5.3
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Frame = -2
Query: 538 NRFMVIIIINKPLSIFHLLYTLASLINTFNIVCWF-SIEFTMSFTLRSATAASTEYN--- 371
N +++ + L IF L L+ + NI ++ ++++ ++ L++ S+ YN
Sbjct: 333 NYLVILSFFSSCLMIFQFGVQLIQLLYSKNISIFYQTMQYLNNYNLQNQKKNSSSYNLGS 392
Query: 370 -GPMT*GIVVPSSSGLTNPSNITCFSLNLLTIVTLSL 263
PMT + + + L SN++ +L+ +TI+T+SL
Sbjct: 393 LFPMTSTVNIQKINQLEKLSNLSQNALDKITILTISL 429
>UniRef50_Q2HQT3 Cluster: DeoR-like protein; n=1; Cystobacter
fuscus|Rep: DeoR-like protein - Cystobacter fuscus
Length = 251
Score = 32.7 bits (71), Expect = 9.2
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +3
Query: 342 GTTMPYVIGPLYSVDAAVADRKVKDMV 422
GTT PY+IGPL VD V D D V
Sbjct: 211 GTTSPYLIGPLSVVDRLVTDSAAPDAV 237
>UniRef50_Q4N9I8 Cluster: DNA-directed RNA polymerase, alpha
subunit, putative; n=1; Theileria parva|Rep:
DNA-directed RNA polymerase, alpha subunit, putative -
Theileria parva
Length = 746
Score = 32.7 bits (71), Expect = 9.2
Identities = 21/75 (28%), Positives = 42/75 (56%)
Frame = -1
Query: 335 VRPYKPVKHYMFFVKFVNNCYTIANATKVA*I*ALSNPSTIINTLNLANGERHLTFKQIS 156
+R +KP ++ ++ ++ N +TIAN+ ++SN TI N+ ++N + TF IS
Sbjct: 28 IRRFKPDSQFLPYL-YITNSHTIANSH------SISNFQTISNSHTISNFQNIPTFNNIS 80
Query: 155 VSIKLHGIMVMRSTQ 111
S+K+ ++R +
Sbjct: 81 -SVKIDKFDILRGVK 94
>UniRef50_Q1DYZ9 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 350
Score = 32.7 bits (71), Expect = 9.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 112 CVERITIMPCSLMDTEICLNVRCRSP 189
C+ + ++PC+ + EIC + CRSP
Sbjct: 8 CLAVLAVVPCATIAAEICAGITCRSP 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,073,858
Number of Sequences: 1657284
Number of extensions: 10241223
Number of successful extensions: 19966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19960
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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