Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120543.Seq
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = -2

Query: 439 WFSIEFTMSFTLRSATAASTEYNGPMT*GIVVPSSSGLTNPSN 311
           W   E   S  ++     S  Y G MT  I +    GL  P N
Sbjct: 342 WVGYEDPESVQIKMDWIKSKGYGGAMTWAIDMDDFHGLCGPKN 384


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 3   NPDEIASGKRLIIKHLQDESQSDI 74
           NP  + SGK L IK + +++   +
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTL 82


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 6   PDEIASGKRLIIKHL 50
           PD I+ G R+II H+
Sbjct: 488 PDLISDGYRVIISHV 502


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 484 LYTLASLINTFNIVCWFSIEFTMSFTL 404
           L+ L+  + TFN +  ++I  T+ FT+
Sbjct: 197 LFLLSQAVETFNDIFGWTILQTVFFTV 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 456 LLTLSVGFQLNLPCPSLYDRRQQRRQN 376
           +LTLS  +Q  +     Y + QQR QN
Sbjct: 160 MLTLSEIYQFIMDLFPFYRQNQQRWQN 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,459
Number of Sequences: 336
Number of extensions: 3148
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)