Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120542.Seq
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 96 8e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 85 1e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 85 1e-15
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 76 9e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 73 5e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 73 5e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 6e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 6e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 73 9e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 69 8e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 69 1e-10
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 67 3e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 67 3e-10
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 67 3e-10
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 67 3e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 67 3e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 66 6e-10
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 66 7e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 1e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 65 2e-09
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 65 2e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 64 3e-09
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 63 7e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 62 1e-08
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 60 6e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 59 9e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 58 1e-07
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 58 1e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 58 1e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 3e-07
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 57 3e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 57 3e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 8e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 51 2e-05
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 49 9e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 48 2e-04
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 47 4e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 47 4e-04
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 47 5e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 45 0.001
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 45 0.001
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 45 0.002
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 45 0.002
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 44 0.003
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 44 0.003
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.006
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 43 0.008
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 42 0.011
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 42 0.014
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 41 0.024
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 41 0.024
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 41 0.032
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 41 0.032
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 40 0.042
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 40 0.042
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 40 0.056
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 40 0.074
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 40 0.074
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 40 0.074
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 39 0.098
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 39 0.098
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 39 0.098
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.098
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 39 0.098
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 39 0.13
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 39 0.13
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 38 0.17
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 38 0.23
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 38 0.30
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 38 0.30
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.30
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 37 0.40
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.52
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 37 0.52
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 36 0.91
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 1.2
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 35 1.6
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 35 2.1
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 3.7
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 33 4.9
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 8.5
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 95.9 bits (228), Expect = 8e-19
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -3
Query: 288 KGGG*ESKSYIIIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 109
K GG + IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 108 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 10
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -1
Query: 431 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 264
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 619 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTN 509
K +VFKFRSV +IVIAPA TGS++N+K AV T TN
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTN 51
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 424 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 507
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 81.8 bits (193), Expect = 1e-14
Identities = 47/96 (48%), Positives = 50/96 (52%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVPL+LGAPD+AFPR+ F PP L
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 237
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV AVGITAF AGAIT+LLTDRNLNTSF
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSF 216
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 424 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 507
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 259
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 260 *DFDSYPPPL 289
F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 213
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/94 (44%), Positives = 48/94 (51%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N LVPL++GAPD+AFPR+ F PP
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH 241
Score = 36.3 bits (80), Expect = 0.69
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V ITA A IT+LLTDRNLNT+F
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 220
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 424 ISS 432
+SS
Sbjct: 155 VSS 157
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH 240
Score = 35.9 bits (79), Expect = 0.91
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V +TA A IT+LLTDRNLNT+F
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 424 ISS 432
+SS
Sbjct: 155 VSS 157
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH 240
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV AV +TA A IT+LLTDRNLNT+F
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 6e-12
Identities = 40/94 (42%), Positives = 47/94 (50%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N L+PL++GAPD+AFPR+ F PP
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 424 ISS 432
ISS
Sbjct: 144 ISS 146
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV AV ITA A IT+LLTDRNLNT+F
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/96 (42%), Positives = 48/96 (50%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVPL++GAPD+AFPR+ F PP L
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 424 ISS 432
+SS
Sbjct: 155 VSS 157
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L FDPAGGGDPILYQHLFW FGH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH 240
Score = 36.3 bits (80), Expect = 0.69
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V ITA A IT+LLTDRNLNT+F
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 424 ISS 432
+SS
Sbjct: 138 VSS 140
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 259
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 260 *DFDSYPPPL 289
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFW 667
FDPAGGGDPILYQHLFW
Sbjct: 203 FDPAGGGDPILYQHLFW 219
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 40/63 (63%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 424 ISS 432
+SS
Sbjct: 156 LSS 158
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/97 (38%), Positives = 47/97 (48%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLY 292
N VPL++GAPD+AFPR+ F PP L+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFG 676
FDPAGGGDPILYQHLFW FG
Sbjct: 221 FDPAGGGDPILYQHLFWFFG 240
Score = 35.9 bits (79), Expect = 0.91
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V ITA AGAIT+LLTDR NT+F
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.9 bits (161), Expect = 1e-10
Identities = 55/182 (30%), Positives = 73/182 (40%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 259
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 260 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 439
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 440 XXXXXXXXXXXXXXXXXXXXNYPICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 619
IC+ Y TC S SYY IIN L + I
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 620 DP 625
P
Sbjct: 203 WP 204
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 379 GRSVDLAIFSLHLAGISS 432
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 46.0 bits (104), Expect = 9e-04
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ +GGGDPILY+HLFW FGH
Sbjct: 221 FEVSGGGDPILYEHLFWFFGH 241
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRI 253
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV ++ ITAF + IT+LL DRN NTSF
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSF 220
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRI 253
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFG 676
F+ +GGGDPILY+HLFW FG
Sbjct: 221 FEVSGGGDPILYEHLFWFFG 240
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV ++ ITAF + IT+LL DRN NTSF
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSF 220
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 424 ISS 432
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 52.4 bits (120), Expect = 1e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
+DPAGGGDPILYQHLFW FGH
Sbjct: 220 YDPAGGGDPILYQHLFWFFGH 240
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 424 ISS 432
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
Score = 39.9 bits (89), Expect = 0.056
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLF 664
+DPAGGGDPILYQHLF
Sbjct: 220 YDPAGGGDPILYQHLF 235
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 424 ISS 432
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 313 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDPAGGGDPILYQHLFW GH
Sbjct: 139 FDPAGGGDPILYQHLFWFXGH 159
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV AV ITA AGAIT+LLTDRN+NTSF
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSF 138
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 66.1 bits (154), Expect = 7e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ AGGGDPI YQH FW FGH
Sbjct: 221 FEVAGGGDPIFYQHAFWFFGH 241
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Score = 36.3 bits (80), Expect = 0.69
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV A+ ITAF + IT+LL DRN NTSF
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSF 220
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +2
Query: 77 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 256
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 257 I*DFDSYPP 283
F PP
Sbjct: 100 NMSFWLLPP 108
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 360
P NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFG 676
F+ AGGGDPILY+HLFW FG
Sbjct: 221 FEVAGGGDPILYEHLFWFFG 240
Score = 41.5 bits (93), Expect = 0.018
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRI 253
N ++PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRI 98
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV A+ ITA + +T+LL DRN NTSF
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSF 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 424 ISS 432
+SS
Sbjct: 158 VSS 160
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N VP+++GAPD+AFPR+ F PP L
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 53.6 bits (123), Expect = 4e-06
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDPAGGGDPILYQHLFW FGH
Sbjct: 223 FDPAGGGDPILYQHLFWFFGH 243
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V +TAF AGAIT+LLTDRN NT+F
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTF 222
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/63 (49%), Positives = 34/63 (53%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 424 ISS 432
SS
Sbjct: 139 ASS 141
Score = 52.4 bits (120), Expect = 1e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDP+GGGDPILYQHLFW FGH
Sbjct: 204 FDPSGGGDPILYQHLFWFFGH 224
Score = 39.1 bits (87), Expect = 0.098
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 424 ISS 432
SS
Sbjct: 163 ASS 165
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVP+++G+PD+AFPR+ F PP L
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 49.2 bits (112), Expect = 9e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FD +GGGDPILYQHLFW FGH
Sbjct: 228 FDASGGGDPILYQHLFWFFGH 248
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV ++ +TAF AGAIT+LLTDRN NTSF
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSF 227
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 424 ISS 432
ISS
Sbjct: 156 ISS 158
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 178
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 179 XXXXXXXN*LVPLILGAPDIAFPRI 253
N L+PL LG PD+ FPR+
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRL 98
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ AGGGDPILYQHLFW FGH
Sbjct: 221 FEVAGGGDPILYQHLFWFFGH 241
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF AV ITA AG IT++LTDRN NTSF
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSF 220
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 424 ISS 432
ISS
Sbjct: 182 ISS 184
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ L ++ AGGGD ILYQHLFW FGH
Sbjct: 236 LLTDRNLNTSFYELAGGGDAILYQHLFWFFGH 267
Score = 37.9 bits (84), Expect = 0.23
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF AV ITA A AIT+LLTDRNLNTSF
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSF 246
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 408
P NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/55 (41%), Positives = 25/55 (45%)
Frame = +2
Query: 509 ICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDPAGGGDPILYQHLFWIF 673
ICM C +Y TCFS S+Y IIN K KY IF P P IF
Sbjct: 96 ICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIF 150
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 310 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 424 ISS 432
+SS
Sbjct: 173 LSS 175
Score = 42.3 bits (95), Expect = 0.011
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F +GGGDP+LY+H+FW FGH
Sbjct: 238 FVVSGGGDPLLYEHIFWFFGH 258
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 89 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIL 626
LFV +V ITA A +T+LL DRN NTSF ++
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 424 ISS 432
+SS
Sbjct: 173 LSS 175
Score = 42.3 bits (95), Expect = 0.011
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F +GGGDP+LY+H+FW FGH
Sbjct: 238 FVVSGGGDPLLYEHIFWFFGH 258
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 89 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIL 626
LFV +V ITA A +T+LL DRN NTSF ++
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 424 ISS 432
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 89 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 39.1 bits (87), Expect = 0.098
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFG 676
F +GGGDP+LY+H+FW FG
Sbjct: 238 FVVSGGGDPLLYEHIFWFFG 257
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIL 626
LFV +V ITA A +T+LL DRN NTSF ++
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 424 ISS 432
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 89 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIL 626
LFV +V ITA A +T+LL DRN NTSF ++
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = +1
Query: 253 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRI 253
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ AGGGD +LYQHLF+ + H
Sbjct: 226 FEYAGGGDAVLYQHLFYWWNH 246
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/63 (49%), Positives = 32/63 (50%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 424 ISS 432
I S
Sbjct: 159 IGS 161
Score = 46.8 bits (106), Expect = 5e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
+DP GGGD +LYQHLFW FGH
Sbjct: 224 YDPVGGGDVVLYQHLFWFFGH 244
Score = 40.7 bits (91), Expect = 0.032
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V +T+F A AIT+LL DRN NTSF
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSF 223
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 178
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 179 XXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N L+PL++G PD+AFPR+ F PP L
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 411
P NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 412 HLAGISS 432
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ AGGGDPIL+QHLFW FGH
Sbjct: 246 FEVAGGGDPILFQHLFWFFGH 266
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 175
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 289
N VP+++G+PD+AFPR+ F PP L
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 51.2 bits (117), Expect = 2e-05
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDPAGGGDPIL+QH+FW FGH
Sbjct: 326 FDPAGGGDPILFQHIFWFFGH 346
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 424 ISS 432
SS
Sbjct: 261 ASS 263
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 250
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 251 I 253
+
Sbjct: 203 L 203
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF +V +TA+ AGAIT+LLTDRN T+F
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTF 325
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 49.2 bits (112), Expect = 9e-05
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+P+GGGDPIL+QHLFW FGH
Sbjct: 310 FEPSGGGDPILFQHLFWFFGH 330
Score = 39.1 bits (87), Expect = 0.098
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 322 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 515 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDPA 628
M C +YS +TC WSYYN IN SKLKYI+F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 322 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 554 TTCFSWSYYNIINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
++ SW N S FDPAGGGD IL+QHLF FGH
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGH 217
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 319 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 46.4 bits (105), Expect = 6e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
+D AGGGDP LYQHLFW FGH
Sbjct: 263 YDAAGGGDPELYQHLFWFFGH 283
Score = 36.3 bits (80), Expect = 0.69
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 119 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
Score = 36.3 bits (80), Expect = 0.69
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LFV +V +TAF A AIT+LLTDRN T+F
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTF 262
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 352 PLSSNIAHRGRSVDLAIFSLHLAGISS 432
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDP GGDP+L+QHLFWIFGH
Sbjct: 262 FDPERGGDPLLWQHLFWIFGH 282
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 424 ISS 432
+SS
Sbjct: 157 MSS 159
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 623 PAGGGDPILYQHLFWIFGH 679
P GGGDPIL+QHLFW FGH
Sbjct: 225 PEGGGDPILWQHLFWFFGH 243
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 182 XXXXXXN*LVPLILGAPDIAFPRI 253
N +PL++ D++ PR+
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRL 99
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 611 IIFDPAGGGDPILYQHLFWIFGH 679
+ FDP GDPILYQHLFW FGH
Sbjct: 224 LFFDPTFAGDPILYQHLFWFFGH 246
Score = 36.7 bits (81), Expect = 0.52
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 316 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 432
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 45.2 bits (102), Expect = 0.001
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 614 IFDPAGGGDPILYQHLFWIFGH 679
+FDPA GGDP+L+QHLFW + H
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSH 266
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL PG I D YN T H N ++PL+LGA D+AFPR+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Score = 41.1 bits (92), Expect = 0.024
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
+D GG+P+LYQHLFW FGH
Sbjct: 230 YDTKKGGNPLLYQHLFWFFGH 250
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 44.8 bits (101), Expect = 0.002
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 614 IFDPAGGGDPILYQHLFWIFGH 679
IFDPA GGDP+L+QH FW + H
Sbjct: 238 IFDPARGGDPVLFQHFFWFYSH 259
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 259
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 260 *DFDSY 277
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 44.8 bits (101), Expect = 0.002
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+P GGGDP++YQHLFW + H
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSH 251
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 629 GGGDPILYQHLFWIFGH 679
GGGDPIL+QHLFWIFGH
Sbjct: 262 GGGDPILWQHLFWIFGH 278
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 325 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 584 IINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
I+ L +D GGDP+LYQHLFW FGH
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 325 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/94 (29%), Positives = 39/94 (41%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N L+PL++GA D+AFPRI F PP
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPP 188
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 626 AGGGDPILYQHLFWIFGH 679
AG G IL+QHLFW FGH
Sbjct: 308 AGEGGAILWQHLFWFFGH 325
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 175
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 176 XXXXXXXXN*LVPLILGAPDIAFPRI 253
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 42.7 bits (96), Expect = 0.008
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 611 IIFDPAGGGDPILYQHLFWIFGH 679
+ F+ + GDP+LYQHLFW FGH
Sbjct: 224 MFFESSNSGDPVLYQHLFWFFGH 246
Score = 40.7 bits (91), Expect = 0.032
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 313 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 432
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FD GGDP+L+QHLFW+FGH
Sbjct: 262 FDHTLGGDPLLWQHLFWLFGH 282
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 41.9 bits (94), Expect = 0.014
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+PA GGD +L+QHLFW FGH
Sbjct: 236 FNPAEGGDVLLWQHLFWFFGH 256
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 41.1 bits (92), Expect = 0.024
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F P GGGDP+L+QH FW + H
Sbjct: 246 FRPEGGGDPVLFQHFFWFYSH 266
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 41.1 bits (92), Expect = 0.024
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 620 DPAGGGDPILYQHLFWIFGH 679
DPA GDP L+QH+FW FGH
Sbjct: 231 DPAASGDPRLFQHIFWFFGH 250
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 40.7 bits (91), Expect = 0.032
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ A GGDPIL QHLFW FGH
Sbjct: 381 FEYAYGGDPILSQHLFWFFGH 401
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 40.7 bits (91), Expect = 0.032
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
+D GGGD IL+QH+FW FGH
Sbjct: 223 YDVVGGGDLILFQHIFWFFGH 243
Score = 39.5 bits (88), Expect = 0.074
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 95 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
G L GD Q YN ++T+H N +P++ G PD+ FPR+
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRL 100
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 244 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 423
P NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 424 ISS 432
ISS
Sbjct: 158 ISS 160
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 617
LF+ A ITA AG +T++L DRN NTSF
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSF 222
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 40.3 bits (90), Expect = 0.042
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FDP GG +L+QH FWIFGH
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGH 259
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 40.3 bits (90), Expect = 0.042
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F A GGD +L+QHLFW+FGH
Sbjct: 236 FQAAAGGDALLWQHLFWLFGH 256
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 39.9 bits (89), Expect = 0.056
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F A GDPIL+QHLFW FGH
Sbjct: 242 FFTAASGDPILWQHLFWFFGH 262
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 39.5 bits (88), Expect = 0.074
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+PA GGDP++YQ++FW + H
Sbjct: 176 FNPAKGGDPLIYQNIFWFYSH 196
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 92 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 39.5 bits (88), Expect = 0.074
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F GGDP+L+QHLFW FGH
Sbjct: 246 FTAERGGDPLLWQHLFWFFGH 266
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 39.5 bits (88), Expect = 0.074
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 629 GGGDPILYQHLFWIFGH 679
GGG P+L+QHLFW FGH
Sbjct: 264 GGGSPLLFQHLFWFFGH 280
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 39.1 bits (87), Expect = 0.098
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 632 GGDPILYQHLFWIFGH 679
GGDP+L+QHLFW FGH
Sbjct: 310 GGDPLLWQHLFWFFGH 325
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 39.1 bits (87), Expect = 0.098
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F A GGD +L+QHLFW+FGH
Sbjct: 236 FQVAEGGDSLLWQHLFWLFGH 256
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 39.1 bits (87), Expect = 0.098
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 635 GDPILYQHLFWIFGH 679
GDP+LYQHLFW FGH
Sbjct: 236 GDPVLYQHLFWFFGH 250
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 331 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 432
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.098
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 80 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 254 II*DFDSYPPPL 289
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 39.1 bits (87), Expect = 0.098
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F GGDPI +QHLFW FGH
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGH 294
Score = 33.1 bits (72), Expect = 6.4
Identities = 24/94 (25%), Positives = 33/94 (35%)
Frame = +2
Query: 2 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 181
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 182 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 283
N +PL++ A D+AFPRI F PP
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPP 162
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 38.7 bits (86), Expect = 0.13
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FD A GG P+L+QHLFW+F H
Sbjct: 256 FDVAHGGRPLLWQHLFWMFAH 276
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 599 KLKYIIFDPAGGGDPILYQHLFWIFGH 679
KL ++DPA GG +L+QHLFW FGH
Sbjct: 240 KLGGHLYDPANGGS-LLWQHLFWFFGH 265
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 77 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
FD A GG P+L+Q LFW FGH
Sbjct: 218 FDSALGGSPVLWQQLFWFFGH 238
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 623 PAGGGDPILYQHLFWIFGH 679
P GGG +L+QHLFW FGH
Sbjct: 270 PHGGGSALLWQHLFWFFGH 288
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F P GGD +L+QHLFW FGH
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGH 258
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 37.5 bits (83), Expect = 0.30
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+P GG+ ++++HLFWIFGH
Sbjct: 229 FNPELGGNTVIWEHLFWIFGH 249
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 37.5 bits (83), Expect = 0.30
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+PA GGDP+L+Q FW + H
Sbjct: 230 FNPAVGGDPVLFQQFFWFYSH 250
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 80 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 37.1 bits (82), Expect = 0.40
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 626 AGGGDPILYQHLFWIFGH 679
AGGG P+L+QHLFW + H
Sbjct: 272 AGGGQPLLWQHLFWFYSH 289
Score = 32.7 bits (71), Expect = 8.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 116 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
+ Y +VT HA N L+PL++GA D+AFP +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTL 131
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 253
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 605 KYI---IFDPAGGGDPILYQHLFWIFGH 679
KYI FD A GGD + YQ+LFW + H
Sbjct: 213 KYIGTHFFDAAAGGDALTYQNLFWFYSH 240
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 36.7 bits (81), Expect = 0.52
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+PA GGDPI Y HLFW H
Sbjct: 222 FNPAVGGDPIAYAHLFWFTFH 242
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 35.9 bits (79), Expect = 0.91
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 557 TCFSWSYYNIINRSKLKYIIFDPAGGGDPILYQHLFWIFGH 679
TCF + +IN + GGG P+L+QHLFW + H
Sbjct: 258 TCFFYPSGLVINNAA------PTVGGGQPLLWQHLFWFYSH 292
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 599 KLKYIIFDPAGGGDPILYQHLFWIFGH 679
KL +F+P GG P+LYQ FW + H
Sbjct: 232 KLGLSMFNPGIGGVPVLYQQFFWFYSH 258
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 35.1 bits (77), Expect = 1.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 632 GGDPILYQHLFWIFGH 679
GG P+L+QHLFW GH
Sbjct: 287 GGSPVLFQHLFWFLGH 302
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 617 FDPAGGGDPILYQHLFWIFGH 679
F+ GG + YQHLFW FGH
Sbjct: 240 FEVLRGGSVVFYQHLFWTFGH 260
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 258 YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 413
+KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 507 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEEETQF---YINIYFGFLD 677
LF ++ IT AG IT+LL+DRN N F IL+ E Y+ FG D
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 678 I 680
+
Sbjct: 76 V 76
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 4 YWNIIFYFWYLIRNNWNIFKTFNS 75
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,860,417
Number of Sequences: 1657284
Number of extensions: 8197464
Number of successful extensions: 18847
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 17894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18793
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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