Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120540.Seq
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.4  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   7.2  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 294 MNSSRKNIEKMFFNCVCCLCCWLDSQNYFLWKQY 193
           + S R+ ++ M    +    CWL  Q YF+   Y
Sbjct: 289 IKSKRRVVKMMMIVVIIFAVCWLPFQIYFILTSY 322


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 267  FRYFCATSSSNKC 305
            F  FC+T SSN C
Sbjct: 1622 FNLFCSTGSSNSC 1634


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 234 CWLDSQNYFLWKQYIC 187
           CW+D    + W+ Y+C
Sbjct: 374 CWIDLVEAWRWQLYMC 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,346
Number of Sequences: 2352
Number of extensions: 18983
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)