Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120539X.Seq
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F21117 Cluster: PREDICTED: similar to transposas...    33   6.9  
UniRef50_UPI000065E97A Cluster: UPI000065E97A related cluster; n...    33   6.9  
UniRef50_UPI00015B5083 Cluster: PREDICTED: hypothetical protein;...    32   9.1  

>UniRef50_UPI0000F21117 Cluster: PREDICTED: similar to transposase;
           n=2; Danio rerio|Rep: PREDICTED: similar to transposase
           - Danio rerio
          Length = 605

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = -1

Query: 225 YFKHLPEESSGNKITALCKKYPEDMMTKVKGYNNCTSNFLSHLKRKH 85
           YF  + E  +G KI + CK       T+++     TSNF++HLKRKH
Sbjct: 12  YFNIVCEGENG-KIESNCKACG----TRIQAKRTVTSNFVTHLKRKH 53


>UniRef50_UPI000065E97A Cluster: UPI000065E97A related cluster; n=1;
           Takifugu rubripes|Rep: UPI000065E97A UniRef100 entry -
           Takifugu rubripes
          Length = 634

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = -1

Query: 225 YFKHLPEESSGNKITALCKKYPEDMMTKVKGYNNCTSNFLSHLKRKH 85
           YF  + E  +G KI + CK       T+++   + TSNF++HLKRKH
Sbjct: 12  YFNIVFEGENG-KIESNCKACG----TRIQAKRSVTSNFVTHLKRKH 53


>UniRef50_UPI00015B5083 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 379

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 310 PPCHQPTLPMMSPPLSHRGIAAS 242
           PPC  PT+P   PPL HR  +++
Sbjct: 246 PPCRAPTMPPPPPPLPHRSTSSA 268


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,588,232
Number of Sequences: 1657284
Number of extensions: 10093826
Number of successful extensions: 25673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25667
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)