Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120539X.Seq
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457563-1|AAL68793.1|   48|Anopheles gambiae hypothetical prote...    26   1.1  
AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding pr...    24   3.3  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   4.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.8  

>AF457563-1|AAL68793.1|   48|Anopheles gambiae hypothetical protein
           16 protein.
          Length = 48

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 322 MILYPPCHQPTLPMMSPP-LSHRGI 251
           ++L PP +  TL   +PP LSH GI
Sbjct: 19  LLLLPPAYSTTLTPPAPPRLSHLGI 43


>AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding
           protein AgamOBP19 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 290 CWLMARGIKDHIYSILNLSSCYY 358
           C   A+G+KDH  +   L  C+Y
Sbjct: 105 CKSAAQGVKDHCEAATILLQCFY 127


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 131 YPLTFVIISSGYFLHRAVILFPDDSSGRCLK 223
           YPLT  I+SSG +  R  I+   D++    K
Sbjct: 116 YPLTSPIVSSGIYSFRVGIIADLDTNSALKK 146


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 299 STNTADDVAASESSRNCGFFYFTVY 225
           +TN++ + A S+ S+N G+F  + Y
Sbjct: 27  NTNSSPNTAGSQGSQNDGYFPPSTY 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,008
Number of Sequences: 2352
Number of extensions: 12400
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)