Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120537.Seq
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.26 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.78 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    26   1.4  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    25   2.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.5  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 503 VATQIWRKQPIAHFVCQRNDCGSTRR*NGSAR 598
           ++T +WR+    H++C  N CG   + NG  R
Sbjct: 126 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 155


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
 Frame = -1

Query: 595 CRAVSASRRAT-IISLANKMSDRL--LPPNLRGHR-QFLRQIVNFGNNII 458
           CR    SR    + + A+++++ L  L PN RG + +  RQ++N GN+II
Sbjct: 734 CRKQHHSRHLERVANKASRITNALTCLMPNKRGPKSRSRRQLINVGNSII 783


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +2

Query: 530 PIAHFVCQRNDCGSTRR*NGSARLRKRAPET--AHWPTAW 643
           PI   +C+     S R     A+LRK   ET  A W   W
Sbjct: 858 PICRAICEDTRVHSRRGTAAGAQLRKEERETTIAEWQATW 897


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 383 NGFWRRSFLKCYARGKYAPAVEMDTNDVIAKIDDLTQKLTVATQIW 520
           NGF    F+ C A G  + A   +  DV+A  +    KLT    +W
Sbjct: 244 NGFCSLWFVNCTAFGTASKAFAKELTDVLA-TERPAAKLTEYRHLW 288


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 609  ARRKRRTGQPHGGHCARRDSQPSNPQLCHS 698
            ARR+RR  +        R++Q  NP L  S
Sbjct: 1065 ARRERRNARRRERRAREREAQQQNPSLVFS 1094


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -2

Query: 300 VQIQRVALL----CHAIWSRCWIWSACSNVDLYLPST 202
           V++Q ++LL    CH  + R  +W  C+ +    PS+
Sbjct: 142 VRVQDISLLIVDECHKNYGRQELWEICARLTHQAPSS 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,708
Number of Sequences: 2352
Number of extensions: 17736
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)