Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120537.Seq
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X92669-1|CAA63356.1|  309|Homo sapiens p35 protein.                    31   3.2  
X87843-1|CAA61112.1|  309|Homo sapiens cdk7/cyclin H assembly fa...    31   3.2  
CR450336-1|CAG29332.1|  309|Homo sapiens MNAT1 protein.                31   3.2  
BC000820-1|AAH00820.1|  309|Homo sapiens menage a trois homolog ...    31   3.2  
AY165512-1|AAN47195.1|  309|Homo sapiens menage a trois 1 (CAK a...    31   3.2  
AF428101-1|AAL26561.1|  599|Homo sapiens dachshund 2 protein.          31   3.2  
U61835-1|AAB05248.1|  267|Homo sapiens cyclin G1 interacting pro...    31   4.2  
BC051272-1|AAH51272.1|  466|Homo sapiens GATA2 protein protein.        30   7.3  
BC018988-1|AAH18988.1|  466|Homo sapiens GATA2 protein protein.        30   7.3  
BC015577-1|AAH15577.1|  466|Homo sapiens GATA2 protein protein.        30   7.3  
BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr...    30   9.7  
BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.      30   9.7  
AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.     30   9.7  

>X92669-1|CAA63356.1|  309|Homo sapiens p35 protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>X87843-1|CAA61112.1|  309|Homo sapiens cdk7/cyclin H assembly
           factor protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>CR450336-1|CAG29332.1|  309|Homo sapiens MNAT1 protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>BC000820-1|AAH00820.1|  309|Homo sapiens menage a trois homolog 1,
           cyclin H assembly factor (Xenopus laevis) protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>AY165512-1|AAN47195.1|  309|Homo sapiens menage a trois 1 (CAK
           assembly factor) protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>AF428101-1|AAL26561.1|  599|Homo sapiens dachshund 2 protein.
          Length = 599

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 561 IVARRDAETARQDCENARRKRRTGQPHGGHCARRDSQP 674
           ++ R+D ET   DC NARRKR+  +    + +R    P
Sbjct: 146 LITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPGRPP 183


>U61835-1|AAB05248.1|  267|Homo sapiens cyclin G1 interacting
           protein protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
 Frame = -1

Query: 697 LWHSCGLLGWLSRLAQCPPCGWPVRR--FR-RAFSQSCRAVSASRRATIISLANKMSDRL 527
           L  SC  L ++     CP CG P+R+  FR + F           R  ++ + NK  +  
Sbjct: 30  LCESCVDLLFVRGAGXCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDF 89

Query: 526 LPPNLRGHRQFLRQ----IVNFGNNI 461
             P+LR +  FL +    + N  NN+
Sbjct: 90  --PSLREYNDFLEEVEEIVFNLTNNV 113


>BC051272-1|AAH51272.1|  466|Homo sapiens GATA2 protein protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 506 ATQIWRKQPIAHFVCQRNDCGSTRR*NGSAR-LRKRAPETAHWPTAWR 646
           AT +WR+    H++C  N CG   + NG  R L K         T WR
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLTTTTTLWR 347


>BC018988-1|AAH18988.1|  466|Homo sapiens GATA2 protein protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 506 ATQIWRKQPIAHFVCQRNDCGSTRR*NGSAR-LRKRAPETAHWPTAWR 646
           AT +WR+    H++C  N CG   + NG  R L K         T WR
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLTTTTTLWR 347


>BC015577-1|AAH15577.1|  466|Homo sapiens GATA2 protein protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 506 ATQIWRKQPIAHFVCQRNDCGSTRR*NGSAR-LRKRAPETAHWPTAWR 646
           AT +WR+    H++C  N CG   + NG  R L K         T WR
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLTTTTTLWR 347


>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
            protein.
          Length = 1732

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270  HAIWSRCWIWSACSNVDLYLPSTWTR 193
            HA++S  W  +AC     Y+P  WT+
Sbjct: 1287 HALFSLAWFHAACQERRNYIPQGWTK 1312


>BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270 HAIWSRCWIWSACSNVDLYLPSTWTR 193
           HA++S  W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16607 fis, clone TESTI4010382, highly  similar
           to Rattus norvegicus dynein, cytoplasmic, heavy chain 2
           (Dnch2). ).
          Length = 1300

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270 HAIWSRCWIWSACSNVDLYLPSTWTR 193
           HA++S  W  +AC     Y+P  WT+
Sbjct: 855 HALFSLAWFHAACQERRNYIPQGWTK 880


>AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38260 fis, clone FCBBF3001377, highly similar to
           Rattus norvegicus dnchc2 mRNA for cytoplasmic dynein
           heavy ).
          Length = 806

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270 HAIWSRCWIWSACSNVDLYLPSTWTR 193
           HA++S  W  +AC     Y+P  WT+
Sbjct: 361 HALFSLAWFHAACQERRNYIPQGWTK 386


>AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11756 fis, clone HEMBA1005595, weakly similar to
           DYNEIN HEAVY CHAIN, CYTOSOLIC. ).
          Length = 553

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270 HAIWSRCWIWSACSNVDLYLPSTWTR 193
           HA++S  W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
          Length = 1685

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 270  HAIWSRCWIWSACSNVDLYLPSTWTR 193
            HA++S  W  +AC     Y+P  WT+
Sbjct: 1240 HALFSLAWFHAACQERRNYIPQGWTK 1265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,118,094
Number of Sequences: 237096
Number of extensions: 2474090
Number of successful extensions: 6480
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6480
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)