Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120535.Seq
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    29   3.0  
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF036692-4|AAS47682.1|  318|Caenorhabditis elegans Serpentine re...    29   3.0  
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    28   6.9  
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z99286-3|CAH60794.1|  320|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z92973-6|CAI79258.1|  440|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
            protein Y42A5A.1 protein.
          Length = 1045

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 57   VYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWDAV 236
            VY+  +N+  QE    L   +  M +H+    D I      T +  +N++ N+ R W  V
Sbjct: 873  VYSAAINDGTQEDFDFLYKKW--MIEHYMMEHDNIF-----TGLCTTNIRENSDRAWRQV 925

Query: 237  VKNGKKYPISTKKLTC 284
            +KNG +  +  +   C
Sbjct: 926  IKNGARENVMVRAQLC 941


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -1

Query: 235 TASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISC 86
           T   + IV+F  L+ +I        +    + +   ID ++TT +DF  C
Sbjct: 38  TRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPMIDMFLTTHLDFTLC 87


>AF036692-4|AAS47682.1|  318|Caenorhabditis elegans Serpentine
           receptor, class x protein14 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
 Frame = -2

Query: 387 KIL*RLYDF*YINLVISSVY*TLSRLLTTPFFVNSTLIFSSRLDIFC-------HFLQLR 229
           KI+ ++Y F +I+++ S +  +L  LL+      +  IFS +  IFC        F ++ 
Sbjct: 109 KIIGQIYTFIWISIIWSHILLSLCSLLSVHIPSRNQSIFSRQNCIFCLIFIFSLSFFEIG 168

Query: 228 PTF--ESCYFA 202
           P F  E+C+ A
Sbjct: 169 PLFAYETCFIA 179


>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
           protein 11 protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = +3

Query: 78  NELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWDAVVKNGKKY 257
           N L+  + +    Y+S+  +FS++V         T + + N+ NN    +D ++     Y
Sbjct: 806 NSLKNGQPVDAEFYDSVSIYFSDIVGFTALSSKSTPLQVVNMLNNLYTNFDTIIDKFDCY 865

Query: 258 PIST 269
            + T
Sbjct: 866 KVET 869


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
            R07G3.3a protein.
          Length = 1982

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +3

Query: 60   YAGHLNNELQEIKSI--LVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWDA 233
            +   +N+   EI+++   V+    +EK   N  D+I+ LK +   +  N++   +++  A
Sbjct: 1368 FTAKINDYKTEIENLNMKVLRMGILEKSLKNTNDQINQLKQENLKLTENIRMAQLQSVSA 1427

Query: 234  VVKNGKKYPISTKK 275
                 K  P S  K
Sbjct: 1428 TDVESKPGPSSASK 1441


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
            R07G3.3b protein.
          Length = 1987

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +3

Query: 60   YAGHLNNELQEIKSI--LVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWDA 233
            +   +N+   EI+++   V+    +EK   N  D+I+ LK +   +  N++   +++  A
Sbjct: 1368 FTAKINDYKTEIENLNMKVLRMGILEKSLKNTNDQINQLKQENLKLTENIRMAQLQSVSA 1427

Query: 234  VVKNGKKYPISTKK 275
                 K  P S  K
Sbjct: 1428 TDVESKPGPSSASK 1441


>Z99286-3|CAH60794.1|  320|Caenorhabditis elegans Hypothetical
           protein Y7A9C.9 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 283 HVNFFVEIGYFLPFFTTASHVRIVLFCKLLNIINVSVL 170
           HV  F+ I +++P   +A  +    +CK+ N I+   L
Sbjct: 204 HVLLFLSIPFYIPIMISAQKISSNQYCKVQNYIHWQTL 241


>Z92973-6|CAI79258.1|  440|Caenorhabditis elegans Hypothetical
           protein Y6G8.5 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/70 (24%), Positives = 35/70 (50%)
 Frame = -1

Query: 244 FFTTASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISCSSLFKCP 65
           FF   S+   + F K +  +NVS+L +++S + +   F ++ ++T    F+     F  P
Sbjct: 219 FFNFTSYFTTLFFFKTMPRLNVSIL-QTLSVSVM--FFLMNRHLTLIPQFLVSIKRFNFP 275

Query: 64  AYTK*PTKQM 35
            +   P+ +M
Sbjct: 276 KFNNFPSSKM 285


>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
           protein T05C1.4b protein.
          Length = 1163

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +2

Query: 368 YSRYNILKYEADE*RYVRRRVGSLDRHGLHLSKFKNAFASVSTTFVH---IPSKHRKMIN 538
           Y R +   Y+ D   + +R  G  +R   HL+   +    +S  ++H   +P+ HR+  +
Sbjct: 121 YPRLDNAWYKNDGYIWKKRTNGKQNRED-HLNLKISGHPHISAKYIHSAIVPTFHRRSYS 179

Query: 539 DAGGSCHNTVKYM 577
                CH  V Y+
Sbjct: 180 VPDSDCHVLVHYL 192


>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
           protein T05C1.4a protein.
          Length = 1185

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +2

Query: 368 YSRYNILKYEADE*RYVRRRVGSLDRHGLHLSKFKNAFASVSTTFVH---IPSKHRKMIN 538
           Y R +   Y+ D   + +R  G  +R   HL+   +    +S  ++H   +P+ HR+  +
Sbjct: 121 YPRLDNAWYKNDGYIWKKRTNGKQNRED-HLNLKISGHPHISAKYIHSAIVPTFHRRSYS 179

Query: 539 DAGGSCHNTVKYM 577
                CH  V Y+
Sbjct: 180 VPDSDCHVLVHYL 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,103,219
Number of Sequences: 27780
Number of extensions: 307302
Number of successful extensions: 973
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)