Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120531.Seq
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 78 6e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 69 5e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 67 1e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 5e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 5e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 5e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 5e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 47 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 47 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 1e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 47 2e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 47 2e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 47 2e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 47 2e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 47 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 45 5e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 0.001
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 0.001
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 40 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.003
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.003
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.008
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.17
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.22
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.29
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.67
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.67
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 31 1.2
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 30 2.1
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 30 2.1
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 2.7
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 2.7
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 29 2.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.6
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 29 3.6
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.3
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 100 bits (239), Expect = 1e-21
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKM 233
Query: 712 TCVFGGAPKREQARD 756
TC+FGGA K QARD
Sbjct: 234 TCLFGGASKGPQARD 248
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QQGVKTMGYKEPTPIQAQGWPIAMSER 515
+ + +++PT IQ+ WPIAMS R
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGR 167
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 712 TCVFGGAPKREQARD 756
C +GG K EQ+ +
Sbjct: 370 ICAYGGGSKWEQSNE 384
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSER 515
++ Y++PTPIQA P A+S R
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 712 TCVFGGAPKREQARD 756
C +GG EQ D
Sbjct: 409 ACTYGGVGISEQIAD 423
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 440
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSER 515
+K Y +PT IQAQ P MS R
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 699
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 700 YVRNTCVFGGAPKREQ 747
++ V GGA + +Q
Sbjct: 406 GIKTVSVIGGASREDQ 421
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = +1
Query: 529 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 690
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 691 HTSYVRNTCVFGGAPKREQ 747
+ Y ++ C++GG + EQ
Sbjct: 188 YNGY-KSVCLYGGGSRPEQ 205
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 270 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 428
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 429 YVQQG-VKTMGYKEPTPIQAQGWPIAMS 509
G ++ G+++P+PIQ+Q WP+ +S
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLS 120
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.4 bits (135), Expect = 5e-09
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 502 LCRKEFSWRTQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 652 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 756
LA QI + A F + S ++ ++GG RE RD
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGG---RENYRD 265
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.4 bits (135), Expect = 5e-09
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 502 LCRKEFSWRTQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 652 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 756
LA QI + A F + S ++ ++GG RE RD
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGG---RENYRD 249
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.4 bits (135), Expect = 5e-09
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 502 LCRKEFSWRTQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 652 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 756
LA QI + A F + S ++ ++GG RE RD
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGG---RENYRD 246
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----FGH 693
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + + G
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK 295
Query: 694 TSY--VRNTCVFGGAPKREQARD 756
+R GG P EQA+D
Sbjct: 296 AGLPEMRAGLCIGGVPIGEQAKD 318
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 529 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 708
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 709 NTCVFGGAPKREQ 747
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 529 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 708
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 709 NTCVFGGAPKREQ 747
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +1
Query: 511 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
K+ + Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
Query: 691 HTSYVRNTCVFGGAPKREQAR 753
V GG R+ R
Sbjct: 122 EYLNVNILPCIGGTSVRDDQR 142
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +1
Query: 511 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
K+ + Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
Query: 691 HTSYVRNTCVFGGAPKREQAR 753
V GG R+ R
Sbjct: 122 EYLNVNILPCIGGTSVRDDQR 142
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 699
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 700 YVRNTCVFGG 729
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+ +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 712 TCVFGGAPKREQARD 756
+ + GG QAR+
Sbjct: 189 SVIVGGRSLIHQARE 203
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 712 TCVFGGAPKREQARD 756
+ + GG QAR+
Sbjct: 189 SVIVGGRSLIHQARE 203
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +1
Query: 508 RKEFSWRTQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 26 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 85
Query: 670 QVAADFGHTSYVRNTCVFGGAPKREQAR 753
+ T+ + T + GG + +Q R
Sbjct: 86 KHINALISTTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +1
Query: 508 RKEFSWRTQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 193 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 252
Query: 670 QVAADFGHTSYVRNTCVFGGAPKREQAR 753
+ T+ + T + GG + +Q R
Sbjct: 253 KHINALISTTQLIATSIVGGLAQVKQER 280
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 423 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
P+ V + ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTY 171
Query: 712 TCVFGGA 732
V GG+
Sbjct: 172 GLVMGGS 178
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 511 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 675
K R +TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVA 678
QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 270
Query: 679 ADFGHTSYVRNTCVFGGAPKREQARD 756
F + + + + ++GG RE +D
Sbjct: 271 RKFAYRTPITSALLYGG---RENYKD 293
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
V +G +V PI F + + +++++ +KT GY PTP+Q P R
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 714
TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 715 CVFGG 729
V GG
Sbjct: 113 TVTGG 117
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
R + G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 706 RNTCVFGGAPKRE 744
+ GG R+
Sbjct: 141 KVMVTTGGTDLRD 153
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 706 RNTCVFGGAPKREQAR 753
+ GG E R
Sbjct: 124 QCHACIGGTNLGEDIR 139
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 706 RNTCVFGGAPKREQAR 753
+ GG E R
Sbjct: 124 QCHACIGGTNLGEDIR 139
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 699
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 700 YVRNTCVFGG 729
++ FGG
Sbjct: 842 GLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 699
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 700 YVRNTCVFGG 729
++ FGG
Sbjct: 842 GLKCGLAFGG 851
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 675
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 509
FE+ N + + GY +PTPIQ P+A++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALT 184
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
+TGSGKT A+ +P + + + P LVL PTRELA QI Q G +
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIA 143
Query: 712 TCVFGGAPKREQA 750
+ GG QA
Sbjct: 144 AVIVGGVDMAAQA 156
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.095
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 663
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +1
Query: 478 FKLKAGR*LCRKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
F++++ L ++ + TGSGKT+ Y+LP + + ++P A++L P + L
Sbjct: 146 FEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLV 201
Query: 658 QQIQQVAADFGHTSYVRNTCVFGGA 732
QI + S V GA
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGA 226
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 663
+TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVAQMGFCFTPTFQQ 286
+ETV+ LE N +RL+ A VA E LE + GK N + A F T +
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLNPKFLARLTASGRFMETGYANE 130
Query: 287 KL 292
K+
Sbjct: 131 KI 132
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 535 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 666
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 467 TDAYSSSRLADSYVGKNLVGVLKRVPAKRWP 559
TDA R+A S++G+ L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDF 333
FR S+RP + +R+ F+ L L+H+ I + +M +L IIS +
Sbjct: 223 FRKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QY 274
Query: 332 IW*SFENCRMWIIKVF 285
+W + C + I +F
Sbjct: 275 LWQLAQGCPVIIYLIF 290
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGAR 119
Query: 706 RNTCVFGGAPK 738
+ V G A K
Sbjct: 120 TSVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 526 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGAR 119
Query: 706 RNTCVFGGAPK 738
+ V G A K
Sbjct: 120 TSVYVGGSAHK 130
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 303 HPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 482
H + R+ +V ++ N + T+ +H + +E A F + +K + I
Sbjct: 213 HNKEISRTDKKVMKFINQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIV 272
Query: 483 AQGWPIAMSERI*LAYSN 536
AQG +A+S + + Y N
Sbjct: 273 AQGHYVAVSSALRVYYKN 290
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 754 PGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 653
PGL L +HH +HT +H +C+Q + A VL
Sbjct: 21 PGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVH 582
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 668 SKLLQILDTHLMFVTRVCLVVLLKESK 748
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 511 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
K+ + ++Q GSGKT+ ++ + I+ + + ++LAP R +AQ+ + G
Sbjct: 34 KDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSLG 88
Query: 691 HTSYVRNTCV 720
V TC+
Sbjct: 89 RNLNVNATCL 98
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 235 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 134
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,845,125
Number of Sequences: 27780
Number of extensions: 356099
Number of successful extensions: 1074
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -