Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120531.Seq
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       51   1e-08
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   7.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.5  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 24/55 (43%), Positives = 32/55 (58%)
 Frame = +3

Query: 351 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
           +N +V VSG  V  PI+ FE A   + V   +K  GYK+PTP+Q    PI M+ R
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGR 234



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +1

Query: 532 QTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 699
           QTGSGKT A+ +P I  +  +            P  ++++PTREL  QI Q    F   S
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300

Query: 700 YVRNTCVFGGAPKREQ 747
            ++    +GG     Q
Sbjct: 301 ILKTVVAYGGTSVMHQ 316


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 261 NPIWATHVLTSREFFFP 211
           +P+W  H+   R   FP
Sbjct: 633 SPVWGRHIYDGRAMGFP 649


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 261 NPIWATHVLTSREFFFP 211
           +P+W  H+   R   FP
Sbjct: 633 SPVWGRHIYDGRAMGFP 649


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 240 HASPRWDSVSLQPFNKNF 293
           H   R+ + S+ P+NKN+
Sbjct: 433 HFQCRYPNASVTPYNKNY 450


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 616 HHLSE*AVGCLCAQWLARCRPTFCRNPFEYA 524
           +++SE  V  L    +   +PT   N FEYA
Sbjct: 180 NYMSELTVDILLETAMGVSKPTRDHNAFEYA 210


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 92  TGIIAVETVVPNLEEATNSA 151
           T + A   V P +EE TN+A
Sbjct: 412 TALGAAALVAPGMEEPTNTA 431


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -2

Query: 757 SPGLALF*EHHQTHTCYEHKMCVQNLQQ 674
           SP L     HHQ HT + H    Q   Q
Sbjct: 160 SPPLVESQMHHQMHTQHPHMQPQQGQHQ 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,456
Number of Sequences: 438
Number of extensions: 4266
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)