Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120528.Seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/32 (21%), Positives = 17/32 (53%)
 Frame = -1

Query: 321 FCYRFQTQNYQPIAMKSVIFVGLRYSIFCSFL 226
           F +RF+   ++P  + ++  V L +   C+ +
Sbjct: 223 FFFRFEKSKFEPFLISNISLVSLIFLFNCTLI 254


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 167 SICKNGV-MVRRDEKSRVFIVKNEQNIEYLKPTNITLFIAI 286
           ++C++   MVRR   +++  +     +EYLK   I +F+++
Sbjct: 174 ALCQDDTPMVRRAAATKLGELAQVVELEYLKTDLIPMFLSL 214


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +2

Query: 32  RGRLKNFNLNINYDGPVKIFVAA 100
           R  L+ + + + YDGP +  +++
Sbjct: 880 RQELEGYKVKLEYDGPYETSISS 902


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2

Query: 455 CFIYHIKWTSGKNHXQY*GFFLTLRDS 375
           CF    KW    N+ QY    L  RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2

Query: 455 CFIYHIKWTSGKNHXQY*GFFLTLRDS 375
           CF    KW    N+ QY    L  RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,139
Number of Sequences: 336
Number of extensions: 3052
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)