Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120526.Seq
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 116 4e-27
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 88 1e-18
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 84 2e-17
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 73 5e-14
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 58 9e-10
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 54 2e-08
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 53 3e-08
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 29 0.47
SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces pom... 28 1.4
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 1.9
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 3.3
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 4.4
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 5.8
SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2 |Schizosac... 26 5.8
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 25 7.7
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 25 7.7
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 116 bits (278), Expect = 4e-27
Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FL-MYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLI 420
G G D+R+LV ++RK+AQ + +Y+E PT LVQ +A+VMQE TQSGGVRPFGVSLL+
Sbjct: 77 GMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLV 136
Query: 421 CGWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
G +E P L+Q DPSG YFAWKATA+GK+ K L+K
Sbjct: 137 AGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEK 176
Score = 99 bits (238), Expect = 3e-22
Identities = 53/78 (67%), Positives = 62/78 (79%)
Frame = +2
Query: 20 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 199
+++Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 200 NKVEMITGHIGMVYSGMG 253
KV IT IGMVYSGMG
Sbjct: 62 EKVCAITPDIGMVYSGMG 79
Score = 56.8 bits (131), Expect = 3e-09
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +3
Query: 462 PLRSLFCMESHSHGKDFNNGKTFLEKRYTEDLELDDAVHTAILTLKE 602
P + F ++ + GK KTFLEKRY ++LELDDAVHTAIL LKE
Sbjct: 151 PSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKE 197
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 88.2 bits (209), Expect = 1e-18
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D R+L+ +AR AQ L +P+ L ++VA V Q+YTQSGGVRPFGVS LI
Sbjct: 76 GLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIA 135
Query: 424 GWEEG--RPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKKD 543
G++ G P ++Q +P+G Y AWKATA+G+ + L+K+
Sbjct: 136 GFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKN 177
Score = 56.8 bits (131), Expect = 3e-09
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +2
Query: 29 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 208
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 209 EMITGHIGMVYSGM 250
M+ H+ + ++G+
Sbjct: 64 AMVDNHVCLAFAGL 77
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 84.2 bits (199), Expect = 2e-17
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D +L+ AR++ QQ ++E +P QLV+ V + Q YTQ GG+RPFGVS L
Sbjct: 78 GLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYA 137
Query: 424 GWEEGRPY-LFQCDPSGAYFAWKATAMG 504
GW+ R Y LFQ +PSG Y +W+A ++G
Sbjct: 138 GWDHIRGYQLFQSNPSGNYGSWQANSIG 165
Score = 55.6 bits (128), Expect = 6e-09
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 196
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 197 VNKVEMITGHIGMVYSGM 250
K+ I ++ +G+
Sbjct: 62 AEKLYHIGDNMLCAVAGL 79
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 72.5 bits (170), Expect = 5e-14
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +2
Query: 8 VIMASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 187
+ M Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L +
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 188 EHSVNKVEMITGHIGMVYSGM 250
HSV K+ I HIG SG+
Sbjct: 61 SHSVEKLFEIDSHIGCAISGL 81
Score = 53.6 bits (123), Expect = 3e-08
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGG------VRPFG 405
G +D R ++ AR Q Y EP Q + + + + RPFG
Sbjct: 80 GLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFG 139
Query: 406 VSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKKDIQK 552
V+LLI G +E P L+ +PSG YF ++A A+G K L K+ K
Sbjct: 140 VALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHK 188
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 58.4 bits (135), Expect = 9e-10
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = +1
Query: 238 LLGNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLL 417
+ G D R+L ++ A ++ PIP +L+ VA Q TQ G RP+GV L
Sbjct: 74 IAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFL 133
Query: 418 ICGWEEGRPYLFQCDPSGAYFAWKATAMG 504
+ G++E P+L + PSG + T+MG
Sbjct: 134 VIGYDESGPHLLEFQPSGLVLEYLGTSMG 162
Score = 46.4 bits (105), Expect = 4e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 14 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 193
M +Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 194 SVNKVEMITGHIGMVYSGM 250
K+ I HIG+ +G+
Sbjct: 61 --KKLIRIDDHIGIAIAGL 77
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 54.0 bits (124), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 238 LLGNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSL- 414
+ G+ +D R V++AR A + P+P L + +A + Q TQ +RP GV++
Sbjct: 78 MTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMT 137
Query: 415 LICGWEEGRPYLFQCDPSGAYFAWKATAMG 504
L+ +E P LF+ DP+G Y +KAT+ G
Sbjct: 138 LVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
Score = 50.4 bits (115), Expect = 2e-07
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 38 SLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 214
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 215 ITGHIGMVYSG 247
IT IG V +G
Sbjct: 70 ITKGIGCVMTG 80
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 53.2 bits (122), Expect = 3e-08
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 50 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 229
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 230 GMVYSGM---GQTIV 265
G+ +G GQ IV
Sbjct: 74 GIATTGFIPDGQHIV 88
Score = 51.2 bits (117), Expect = 1e-07
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +1
Query: 256 DYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLICGWEE 435
D + +V +AR A Y PIP + + +Q +T VRPFGV + ++
Sbjct: 83 DGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDS 142
Query: 436 GRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
P+L+ +P+G Y+ + A GK + + L+K
Sbjct: 143 EGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEK 177
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 29.5 bits (63), Expect = 0.47
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 234 MPMWPVIISTLLTLCSSYSM 175
+P+WP+++S LL + SY M
Sbjct: 1508 LPLWPIVVSELLIIFKSYCM 1527
>SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +1
Query: 343 VQHVATVMQEYTQSGGVRPFGVSLL----ICGWEEGRPYLFQCDPSGAYFAWKATAMGKT 510
V + A + + YT + L + W P L P GA+ + +GK
Sbjct: 202 VVNTADISENYTFDAPANELYATFLDPARVAAWSRAPPQL-DVRPQGAFSLFHGNVVGKF 260
Query: 511 LIMEKLSLKKDIQKTW 558
L++E+ K I +TW
Sbjct: 261 LVLEE---NKKIVQTW 273
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 331 SGSAHDTSRITAGPSSLLESPVDDSLTHSRVNHANV 224
S ++H S + GP S ++ S THS +H NV
Sbjct: 17 SNNSHGDSFVNEGPPSNFKNNSLTSSTHSSTDHVNV 52
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 222 PVIISTLLTLCSSYSMLLCLFSVAITTPFDALMPTEVPPAA 100
P +++T CSS L L + P A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.2 bits (55), Expect = 4.4
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = -2
Query: 228 MWPVIISTLLTLCSSYSMLLCLFSVAITTP 139
+W +++ L + ++S ++C+F V + P
Sbjct: 2245 LWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -2
Query: 225 WPVIISTLLTLCSSYSMLLCLFSVAITTP 139
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 486 ESHSHGKDFNNGKTFLEKRYTEDLELDDAV 575
E ++ G DF + KTF TE+ E D+ +
Sbjct: 140 EQNTDGSDFPSMKTFFNVMNTEEQEADEVM 169
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 125 CRRKYHRRLRQLKHIR 78
C+R +HR+ Q++HIR
Sbjct: 9 CKRVFHRQEHQVRHIR 24
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = -1
Query: 304 ITAGPSSLLESPVDDSLTHSRVNHANVASYH 212
+ + PS++ SP D + ++N + + +YH
Sbjct: 224 VLSSPSTIWWSPDSDKIAFLKLNESEIPTYH 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,978,425
Number of Sequences: 5004
Number of extensions: 63377
Number of successful extensions: 180
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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