Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120526.Seq
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 126 1e-29
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 126 1e-29
06_01_0539 + 3869156-3869908 91 1e-18
06_01_0529 + 3831100-3831852 91 1e-18
06_01_0479 + 3419657-3420337 91 1e-18
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 83 2e-16
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 81 6e-16
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 71 1e-12
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 62 3e-10
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 59 3e-09
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 58 5e-09
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 58 6e-09
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 45 5e-05
05_05_0100 + 22388457-22388561,22388657-22388808,22388897-223892... 31 0.64
05_05_0099 - 22381586-22382604,22382683-22383056,22383145-223832... 31 0.64
04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497 31 0.64
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 29 2.6
05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 29 3.4
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 29 4.5
09_04_0623 - 19038777-19040561 28 6.0
06_02_0237 + 13341469-13342259,13342839-13343223,13343314-133434... 28 6.0
01_06_1309 - 36170947-36171077,36171227-36172198,36172285-361724... 28 6.0
12_02_0699 + 22245933-22246213,22246493-22246575,22246844-222471... 28 7.9
03_01_0320 - 2510907-2512190 28 7.9
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 126 bits (305), Expect = 1e-29
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G G D+R+LV ++RK AQQ + +Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI
Sbjct: 138 GMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIA 197
Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
G+++ P L+Q DPSG+YF+WKA+AMGK + K L+K
Sbjct: 198 GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEK 236
Score = 70.9 bits (166), Expect = 9e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +3
Query: 462 PLRSLFCMESHSHGKDFNNGKTFLEKRYTEDLELDDAVHTAILTLKEG 605
P S F ++ + GK+ +N KTFLEKRYTED+ELDDA+HTAILTLKEG
Sbjct: 211 PSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEG 258
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 131 ASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMG 253
A+NGVVIATE K SIL DE SV K++ +T +IG+VYSGMG
Sbjct: 100 AANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMG 140
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 53 SPSGKLVQIEYALAAVAAGGTSVGIK 130
SPSGKLVQIE+AL AV +G TS+GIK
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIK 69
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 605 FEGQMTADNIEVGICDAS-GFRRLEPA 682
+EGQ++A+NIE+GI + F+ L PA
Sbjct: 259 YEGQISANNIEIGIIRSDREFKVLSPA 285
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 126 bits (305), Expect = 1e-29
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G G D+R+LV ++RK AQQ + +Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI
Sbjct: 101 GMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIA 160
Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
G+++ P L+Q DPSG+YF+WKA+AMGK + K L+K
Sbjct: 161 GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEK 199
Score = 91.9 bits (218), Expect = 4e-19
Identities = 56/103 (54%), Positives = 66/103 (64%), Gaps = 23/103 (22%)
Frame = +2
Query: 14 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIK--------------------- 130
M +YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIK
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKG 60
Query: 131 --ASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMG 253
A+NGVVIATE K SIL DE SV K++ +T +IG+VYSGMG
Sbjct: 61 RGAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMG 103
Score = 70.9 bits (166), Expect = 9e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +3
Query: 462 PLRSLFCMESHSHGKDFNNGKTFLEKRYTEDLELDDAVHTAILTLKEG 605
P S F ++ + GK+ +N KTFLEKRYTED+ELDDA+HTAILTLKEG
Sbjct: 174 PSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEG 221
>06_01_0539 + 3869156-3869908
Length = 250
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 253 SDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLICGWE 432
SD +L+ AR AQ+ L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW+
Sbjct: 81 SDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWD 140
Query: 433 EGRPY-LFQCDPSGAYFAWKATAMGKTLIMEKLSLKKD 543
+ + L+ DPSG Y WKA A+G + LK+D
Sbjct: 141 KHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQD 178
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 196
S RY T FSP G+L Q+EYA+ A+ G+++G+ A++GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 61
Query: 197 VNKVEMITGHIGMVYSGM 250
K+ I H+ +G+
Sbjct: 62 AEKMYKIDSHLACAVAGI 79
>06_01_0529 + 3831100-3831852
Length = 250
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 253 SDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLICGWE 432
SD +L+ AR AQ+ L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW+
Sbjct: 81 SDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWD 140
Query: 433 EGRPY-LFQCDPSGAYFAWKATAMGKTLIMEKLSLKKD 543
+ + L+ DPSG Y WKA A+G + LK+D
Sbjct: 141 KHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQD 178
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 196
S RY T FSP G+L Q+EYA+ A+ G+++G+ A++GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 61
Query: 197 VNKVEMITGHIGMVYSGM 250
K+ I H+ +G+
Sbjct: 62 AEKMYKIDSHLACAVAGI 79
>06_01_0479 + 3419657-3420337
Length = 226
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 253 SDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLICGWE 432
SD +L+ AR AQ+ L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW+
Sbjct: 57 SDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWD 116
Query: 433 EGRPY-LFQCDPSGAYFAWKATAMGKTLIMEKLSLKKD 543
+ + L+ DPSG Y WKA A+G + LK+D
Sbjct: 117 KHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQD 154
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 83.4 bits (197), Expect = 2e-16
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D R+L+ +AR Q L +P+ + +++A + Q+YTQSGGVRPFG+S LI
Sbjct: 146 GLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIV 205
Query: 424 GWE--EGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKKDIQKT 555
G++ +P L+Q DPSG + AWKA A G+ + L+K+ + T
Sbjct: 206 GFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDT 251
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +2
Query: 26 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 205
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+ E K L D S+ K
Sbjct: 73 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRK 132
Query: 206 VEMITGHIGMVYSGM 250
+ + HI + +G+
Sbjct: 133 IASLDTHIALACAGL 147
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 81.4 bits (192), Expect = 6e-16
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D R+L+ +AR Q L + + + +++A + Q+YTQSGGVRPFG+S LI
Sbjct: 76 GLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIV 135
Query: 424 GWE--EGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKKDIQKT 555
G++ +P L+Q DPSG + AWKA A G+ + L+K+ ++T
Sbjct: 136 GFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +2
Query: 26 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 205
RY ++T FSP G L Q+EYAL AV G +VG++ S+ VV+ E K L D SV K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 206 VEMITGHIGMVYSGM 250
+ + HI + +G+
Sbjct: 63 IASLDTHIALACAGL 77
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +2
Query: 29 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 208
Y + TFSP G+L Q+EYA+ A+ G T++G+K +GVV+A E + S L + SV K+
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKI 80
Query: 209 EMITGHIGMVYSGM 250
I HIG SG+
Sbjct: 81 MEIDEHIGCAMSGL 94
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 253 SDYRLLVTQARKMAQQ*FLMYHEPIP---TAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
+D R LV AR Q Y EP+ T Q + +A E + RPFGVSLLI
Sbjct: 96 ADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIA 155
Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKKDIQKT 555
G +E P L+ DPSG ++ A A+G SL++ K+
Sbjct: 156 GHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKS 199
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 GLLGNG--SDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGV 408
GLL G +D R LV QAR A + + +P L + +A Q YTQ +RP GV
Sbjct: 77 GLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGV 136
Query: 409 SLLICGW-EEGRPYLFQCDPSGAYFAWKATAMG 504
++ G+ EE LF+CDP+G +F KAT+ G
Sbjct: 137 VAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAG 169
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 205
Y +T FSP G+L Q+EYA AV +AG TS+G++ + V + T+ K L D SV
Sbjct: 9 YDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
Query: 206 VEMITGHIGMVYSGM 250
+ IT +IG++ +G+
Sbjct: 69 LFPITKYIGLLATGL 83
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +1
Query: 235 GLLGNG--SDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGV 408
GLL G D R + +AR A + + + L Q +A Q TQ +RP+GV
Sbjct: 135 GLLATGMPGDGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGV 194
Query: 409 SLLICGWEE--GRPYLFQCDPSGAYFAWKATAMG 504
+I G +E G P LF CDP+G +FA KAT+ G
Sbjct: 195 VSMIFGIDEEKGTPELFTCDPAGQFFAHKATSAG 228
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 EYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGM 250
+YA AV AG TSVG++ + V + T K L+D ++ + IT IG++ +GM
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRKEDK-LHDPTTITNLFAITDRIGLLATGM 141
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +2
Query: 29 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 208
Y S+TTFSP G++ Q+EYA AV GT VGIK +G+V+ E S + E S ++
Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
Query: 209 EMITGHIGM 235
+ H G+
Sbjct: 68 HSVHWHSGL 76
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D R +V++A+ A +Y EPI +L VA+ + T +RPFG +++
Sbjct: 88 GLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILG 147
Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
G++ P L+ +PSG + + A+GK K ++K
Sbjct: 148 GYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 186
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +2
Query: 29 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 208
Y S+TTFSP G++ Q+EYA AV GT VGIK +G+V+ E S + + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSNRRL 67
Query: 209 EMITGHIGMVYSGM 250
+ H G+ +G+
Sbjct: 68 HSVHRHSGLAVAGL 81
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +1
Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
G +D R +V++A+ A +Y EP+P +L VA+ + T +RPFG +++
Sbjct: 80 GLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILG 139
Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGK 507
G++ P L+ +PSG + + A+GK
Sbjct: 140 GYDRDGPQLYMIEPSGLSYKYFGAALGK 167
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 361 VMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
V+Q TQ RP+GV LL+ G +E +L+ PSG YF ++A A+G K L++
Sbjct: 117 VLQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLER 176
>05_05_0100 +
22388457-22388561,22388657-22388808,22388897-22389270,
22389349-22390367
Length = 549
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 313 YHEPIPTAQLVQHV-ATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQC--DPSGAYFA 483
Y P A+ HV TV+ + + G+ L+ GW +G Y+ QC P G+Y
Sbjct: 57 YPGPTLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSY-V 115
Query: 484 WKATAMGK 507
++ T G+
Sbjct: 116 YRFTITGQ 123
>05_05_0099 -
22381586-22382604,22382683-22383056,22383145-22383296,
22383392-22383496
Length = 549
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 313 YHEPIPTAQLVQHV-ATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQC--DPSGAYFA 483
Y P A+ HV TV+ + + G+ L+ GW +G Y+ QC P G+Y
Sbjct: 57 YPGPTLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSY-V 115
Query: 484 WKATAMGK 507
++ T G+
Sbjct: 116 YRFTITGQ 123
>04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497
Length = 398
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 358 TVMQEYTQSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGK 507
T QEYT +G R LI E PY +F C + A A+KA+ +GK
Sbjct: 296 TPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGK 346
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 61 GQISANRICFSCRSRRWYFRRHQSVKWR 144
G +++C SC+ R+ +HQ++ WR
Sbjct: 196 GTWKGDKLCSSCKKARYCSEKHQTLHWR 223
>05_03_0257 +
11145558-11145876,11148181-11148347,11149114-11149311,
11149405-11149650
Length = 309
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 437 PSSQPQINRDTPKGRTPPDCVYSCMTVATCCTNCAV 330
PSS P++ P GR P C S +++T C AV
Sbjct: 6 PSSFPRVIALLPDGRRPSPCRSSSSSLSTACDRGAV 41
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 135 DALMPTEVPPAATAAKAYSICTNLPEGLNVV 43
DA M EV AATA+ A+S + LP G N +
Sbjct: 475 DATM-AEVEAAATASNAHSFISTLPNGYNTM 504
>09_04_0623 - 19038777-19040561
Length = 594
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = -1
Query: 535 SRKVFPLLKSFPWLWLSMQNRLRRGHTGTGKDVLLPSHRSIEIPQ 401
+R++FP S +L+LS ++ R ++VL+P + +E+P+
Sbjct: 255 ARRMFPRESSQEYLFLSDEHYAYRVRNRLRREVLVPLRKVLELPE 299
>06_02_0237 +
13341469-13342259,13342839-13343223,13343314-13343427,
13343517-13344011
Length = 594
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 228 MWPVIISTLLTLCSSYSMLLCLFSVAITTPFDALMPTEVPPAATAAKAYSICTNLPEGLN 49
M+P ++ +L + + + + S + P D L PTE+ +A A+S+ + P +
Sbjct: 1 MYPPLV-LVLAIFFAVATAIAALSSPLPHPLDPLSPTELTAVRSAVLAFSLVASRPISFH 59
Query: 48 VV 43
V
Sbjct: 60 YV 61
>01_06_1309 -
36170947-36171077,36171227-36172198,36172285-36172413,
36172535-36172779,36172904-36173055,36173202-36173306
Length = 577
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 403 GVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 507
G+ L GW +G Y+ QC P G+Y +K T G+
Sbjct: 88 GIRQLRSGWADGPAYITQCPIQPGGSY-VYKYTITGQ 123
>12_02_0699 +
22245933-22246213,22246493-22246575,22246844-22247125,
22248725-22248986,22250146-22251781,22251910-22252416
Length = 1016
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 194 SVNKVEMITGHIGMVYSGMGQTIVYW 271
S+N + GH+ M G+G +V W
Sbjct: 247 SINNYALFMGHMSMAVKGLGYLLVLW 272
>03_01_0320 - 2510907-2512190
Length = 427
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 529 KVFPLLKSFPWLWLSMQNRLRRGHTGTGKDVLL 431
+V L+ PW+ ++ ++ HTGTGK++ L
Sbjct: 175 EVHKLIAMGPWVLAGVRGAVKAIHTGTGKELRL 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,640,735
Number of Sequences: 37544
Number of extensions: 470243
Number of successful extensions: 1271
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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