Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120526.Seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...   168   2e-43
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.2  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.0  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score =  168 bits (408), Expect = 2e-43
 Identities = 78/99 (78%), Positives = 84/99 (84%)
 Frame = +1

Query: 244 GNGSDYRLLVTQARKMAQQ*FLMYHEPIPTAQLVQHVATVMQEYTQSGGVRPFGVSLLIC 423
           G G DYRLLV QARK+AQ  +L Y EPIPT+QLVQ VATVMQEYTQSGGVRPFGVSLLIC
Sbjct: 78  GMGPDYRLLVKQARKLAQNYYLTYREPIPTSQLVQKVATVMQEYTQSGGVRPFGVSLLIC 137

Query: 424 GWEEGRPYLFQCDPSGAYFAWKATAMGKTLIMEKLSLKK 540
           GW++GRPYLFQCDPSGAYFAWKATAMGK     K  L+K
Sbjct: 138 GWDDGRPYLFQCDPSGAYFAWKATAMGKNANNGKTFLEK 176



 Score =  148 bits (359), Expect = 1e-37
 Identities = 72/80 (90%), Positives = 75/80 (93%)
 Frame = +2

Query: 14  MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 193
           MASERYSFSLTTFSPSGKLVQIEYALAAVAAG  SVGIKA NGVVIATENK KSILYDEH
Sbjct: 1   MASERYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKAVNGVVIATENKQKSILYDEH 60

Query: 194 SVNKVEMITGHIGMVYSGMG 253
           SV+KVEM+T HIGM+YSGMG
Sbjct: 61  SVHKVEMVTNHIGMIYSGMG 80



 Score = 73.3 bits (172), Expect = 6e-15
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +3

Query: 462 PLRSLFCMESHSHGKDFNNGKTFLEKRYTEDLELDDAVHTAILTLKEG 605
           P  + F  ++ + GK+ NNGKTFLEKRY+EDLELDDAVHTAILTLKEG
Sbjct: 151 PSGAYFAWKATAMGKNANNGKTFLEKRYSEDLELDDAVHTAILTLKEG 198



 Score = 53.2 bits (122), Expect = 7e-09
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 605 FEGQMTADNIEVGICDASGFRRLEPA 682
           FEGQM ADNIEVGICDA+GFRRL+P+
Sbjct: 199 FEGQMNADNIEVGICDANGFRRLDPS 224


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 41   LTTFSPSGKLVQIEYALAAVAAGGTSVGIKASN 139
            ++   P G+   I   +A +A GG  VG  A+N
Sbjct: 2678 VSLIDPDGQFAFISIIVAVLAVGGAYVGASAAN 2710


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 412 LLICGWEEGRPYLFQCDPSGAYFAW 486
           +++  W E    L  CD SG  F W
Sbjct: 67  VILVKWNEPYQKLASCDSSGIIFVW 91


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 680 LALSDGTRSRHRCQLLCYLQSFDPQTFLKGQDSCV 576
           L + D  R  HRC  L +  ++    + +G+D  V
Sbjct: 369 LDIDDDFRCNHRCNTLPHNPTYYRTVYRQGEDGSV 403


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -3

Query: 467 EGSH-WNR*GRPSSQPQINRDTPKGRTP 387
           EGS  WN   RP  Q  + R  PK   P
Sbjct: 540 EGSQEWNSRSRPPQQHSMLRTGPKSLAP 567


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,854
Number of Sequences: 2352
Number of extensions: 15449
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)