Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120525X.Seq
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57784| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 29 2.4
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8504| Best HMM Match : SpoU_methylase (HMM E-Value=1.7e-28) 29 3.2
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.2
SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_26359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 28 5.6
SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27) 27 7.3
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 27 7.3
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08) 27 7.3
SB_24499| Best HMM Match : Fibrinogen_C (HMM E-Value=0.00053) 27 7.3
SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_17034| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_15242| Best HMM Match : E2F_TDP (HMM E-Value=6e-14) 27 7.3
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 27 7.3
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 27 9.7
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 27 9.7
SB_25540| Best HMM Match : Thyroglobulin_1 (HMM E-Value=2.8e-05) 27 9.7
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 27 9.7
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0) 27 9.7
SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_54472| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_43089| Best HMM Match : Vicilin_N (HMM E-Value=0.17) 27 9.7
SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047) 27 9.7
SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3) 27 9.7
>SB_57784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = +2
Query: 158 TEFNKCIVSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRR 337
T+F C+ S F +A T N+ F +K P +G L TC
Sbjct: 522 TQFMFCVDS--PCFNVKATETIRAKKTHNVIVGFEGNQGGSKAPRMGKLMVTCPRSAGGA 579
Query: 338 RHPTWT 355
+ TWT
Sbjct: 580 GNVTWT 585
>SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 530 IGPKQHVHMRGMPNMGLKKMSQPFCKPSSRVLSEDAKYLHLHSKH*IL 387
+GP Q + K +S+ F S +A ++HLH+ H +L
Sbjct: 74 VGPTQRAAAKEATEPSAKTISKAFSMEMSNSFPFEASFIHLHNLHVVL 121
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = +2
Query: 251 SNFCATSSS-NKCPNLGPLCN-----TCKHITIRRRHPTWTRS--CVSRASPQTKFNVSS 406
++FCA S +KC P+CN C + +P RS C S + K
Sbjct: 14 ASFCAKGSRPDKC---APICNKMYQPVCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKC 70
Query: 407 ANADTWRPR*APSTKACKMVG 469
++ + + TK CKM+G
Sbjct: 71 GSSQSCEQKKCKGTKVCKMIG 91
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 29.1 bits (62), Expect = 2.4
Identities = 28/93 (30%), Positives = 43/93 (46%)
Frame = +2
Query: 170 KCIVSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRRRHPT 349
K + S FE+ ++T + + IF++ A SS K P L ++ R+
Sbjct: 1526 KVVCGHVSDFESLEDDTQVVATARGIFTHGGA-SSRRKSP---VLVSSSPRGPSRK---A 1578
Query: 350 WTRSCVSRASPQTKFNVSSANADTWRPR*APST 448
W R +SR + K+N SS +D R R AP T
Sbjct: 1579 WNRRFISRCKSKIKYNRSSL-SDRSRKRPAPIT 1610
>SB_8504| Best HMM Match : SpoU_methylase (HMM E-Value=1.7e-28)
Length = 647
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 278 NKCPNLGPLCNTCKHITIRR 337
NK PNLG LC TC+ +R
Sbjct: 470 NKAPNLGGLCRTCEIFGAKR 489
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 FARRVHQTSAPI*DHYAILANILQSDAGTRRGRDHVSVVQ-ARKQNSMFRVQMQILGVLA 434
F R HQ + Y + I +SD G RGR VS+ Q R + M LG
Sbjct: 124 FEERKHQRDYV--EFYMDKSGICESDIGRIRGRQTVSLGQGCRNPGHVTHELMHTLGFYH 181
Query: 435 EHPR 446
EH R
Sbjct: 182 EHTR 185
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +2
Query: 179 VSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRRRHPTWTR 358
+S+KS EN+ NN + N+ N ++ +T + PN P RRR
Sbjct: 205 LSLKSLLENRRNNKYSRRNLPNPDNDNTSTITPQAAPNTNPPPVATPAPQRRRRRRRRKN 264
Query: 359 SCVSRASPQTKFNVSSAN 412
+ V + N+SS +
Sbjct: 265 NSVVTLDSTSVINISSTS 282
>SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 179 VSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLG--PLCNTCKHITIRRRHPTW 352
+S+KS EN+ NN + N+ N ++ +T + PN P+ RRR
Sbjct: 31 LSLKSLLENRRNNKYSRRNLPNPDNDNTSTITPQAAPNTNPPPVATPAPQRRRRRRRRIR 90
Query: 353 TRSCVSRASPQTKFNVSSAN 412
+ V + N+SS +
Sbjct: 91 KNNSVVTLDSTSVINISSTS 110
>SB_26359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 203 NQANNTDNIHNVKNIFSNFCATSSSNKCPNLG 298
N N+ NI + I FCAT+SSN G
Sbjct: 13 NSCNHEKNIIGTQKIVDLFCATTSSNNIHERG 44
>SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 179 VSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLG--PLCNTCKHITIRRRHPTW 352
+S+KS EN+ NN + N+ N ++ +T + PN P+ RRR
Sbjct: 3 LSLKSLLENRRNNKYSRRNLPNPDNDNTSTITPQAAPNTNPPPVATPAPQRRRRRRRRRR 62
Query: 353 TRSCVSRASPQTKFNVSSAN 412
+ V + N+SS +
Sbjct: 63 KNNSVVTLDSTSVINISSTS 82
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 169 QMYCFHKK*F*ESSQQHRQHTQCKKHFFEFLRDEFIKQVPQFRTIMQYLQTYYNPTPAP 345
Q H++ + QQ Q K+ + L E +KQ Q R + Q+LQ P P P
Sbjct: 735 QQQQLHREQLKQKQQQQLHQEQLKQQQQQQLHREQLKQQQQQR-LQQHLQQQQQPPPPP 792
>SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27)
Length = 611
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -3
Query: 129 IKLWLKYFENKKHNESISSR-----NNCASKHTFSKR 34
IKLWLK N +NE +S + +NC +K+ + ++
Sbjct: 189 IKLWLKLSNNNGNNEKLSRKAFATISNCENKNFWHRK 225
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 275 SNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVSSANADTWRP 430
S KCP L +CN C+ ++ H + + C +A P K VS+A TW P
Sbjct: 115 STKCPALEAICNKCQ----KKGH--FAKVCKGKAVP--KERVSAA---TWSP 155
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 131 VDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFSN 256
VD KG TF FN C + ++ N NN +N +N N +N
Sbjct: 70 VDRKG-TFIDSFNFCNNNNNNNNNNNNNNNNNNNNNNNNNNN 110
>SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08)
Length = 690
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 328 NPTPAPDVDEIMCQSCKPANKIQCFECKCRY 420
NP P +++C+ C+ +QC +C+ Y
Sbjct: 5 NPLANPKGVKLVCELCQKPAFVQCTDCRVTY 35
>SB_24499| Best HMM Match : Fibrinogen_C (HMM E-Value=0.00053)
Length = 274
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 307 QYLQTYYNPTPAPDVDEIMCQS-CKPANKIQCFECKCR 417
+Y+Q NP D D M +S C P + ++C CR
Sbjct: 8 EYIQWLKNPC---DPDHCMYESQCNPVSNADIYQCNCR 42
>SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 129 IKLWLKYFENKKHNESISSRNNCASKHTFSKRSYVLNLK 13
IKLWLK N +NE +S + + A + +K + +K
Sbjct: 361 IKLWLKLSNNNGNNEKLSRKASAAISNYENKNFWHRKIK 399
>SB_17034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 182 SIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLG 298
S +S N+ N++N+ + AT ++N+C NLG
Sbjct: 296 SKNNSLPRSLNSQHNVYNIASGSRKNSATINTNECSNLG 334
>SB_15242| Best HMM Match : E2F_TDP (HMM E-Value=6e-14)
Length = 273
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +2
Query: 263 ATSSSNKCPNL---GPLCNTCKHITIRRRHPT----WTRSCVSRASPQTKFNVSSANADT 421
+T SN L G C+T + R+ HP +TRSC S + ++S+
Sbjct: 162 STQPSNSLAKLFEQGMGCSTVRTYAGRQAHPNEIEEFTRSCASGLVTTEREGLNSSLRHA 221
Query: 422 WRPR*AP 442
WR R +P
Sbjct: 222 WRMRTSP 228
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 205 SSQQHRQHTQCKKHFFEFLRDEFIKQVPQFR 297
++ Q H +CK+ FF F F+ P+ R
Sbjct: 443 TAPQEYSHIKCKRQFFIFFFSSFLSSTPRQR 473
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 248 FSNFCATSSSNKCPNLGPLCNTCKHITIRRRH 343
F+ F ATS CP C+ +I I+ H
Sbjct: 14 FTGFKATSDGRSCPRPADPCSAANYIPIKDPH 45
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 191 SSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVS 370
S+ N +N+ +N +N N +N ++SSS+ PL C IT+ T T + +S
Sbjct: 27 SNNNNNSNSNNNNNNNNNNNNNNSSSSSSSSNKKTTPL---CPPITL-----TQTPTSIS 78
Query: 371 RASPQTKFNVSSANADT 421
+P T N+++ ++ T
Sbjct: 79 NVTP-TPTNINNISSTT 94
>SB_25540| Best HMM Match : Thyroglobulin_1 (HMM E-Value=2.8e-05)
Length = 162
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +2
Query: 266 TSSSNKCPNLGPLCNTCKHITIRRR----HPTWTR 358
TSS N CPN G N C+ ++R P+W +
Sbjct: 36 TSSYNPCPNGGNAYNGCQETDCQKRARITEPSWQK 70
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +2
Query: 266 TSSSNKCPNLGPLCNTCKHITIRRR----HPTWTR 358
TSS N CPN G N C+ ++R P+W +
Sbjct: 436 TSSYNPCPNGGNAYNGCQETDCQKRARITEPSWQK 470
>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1457
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 203 NQANNTDNIHNVKNI 247
N NNTDNI+N+ NI
Sbjct: 1375 NNINNTDNINNIDNI 1389
>SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 129 IKLWLKYFENKKHNESISSR 70
IKLWLK+ N +NE +S +
Sbjct: 184 IKLWLKFSNNNGNNEKLSRK 203
>SB_54472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 515 HVHMRGMPNMGLKKMSQPFCKPS-SRVLSEDAKYLHLHSK 399
++HM+ MPN+ QP P+ SR++ A + L+S+
Sbjct: 9 YIHMKVMPNIECPTSRQPVPNPAHSRLIVTSAAHSRLNSR 48
>SB_43089| Best HMM Match : Vicilin_N (HMM E-Value=0.17)
Length = 305
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 203 NQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRRRHPTWTR 358
N +NN N N N +N ++SN+ N L N+ + T + P TR
Sbjct: 253 NNSNNNSNRLNNSNRLNNSNGLNNSNRLNNSNRLNNSNRAKTCKSSWPNKTR 304
>SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047)
Length = 660
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 161 EFNKCIVSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGPLCNTCKHITIRRR 340
+ K I + KSS ++ NN +N +N N +N ++++K + C K ++RR
Sbjct: 136 KLGKVIQATKSSNFSRNNNNNNNNNNNN--NNNNNNNNNSKKASFTSCCRNSK--LLKRR 191
Query: 341 HPT 349
HP+
Sbjct: 192 HPS 194
>SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3)
Length = 535
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 179 VSIKSSFENQANNTDNIHNVKNIFSNFCATSSSNKCPNLGP 301
+S+KS EN+ NN + N+ N ++ +T + PN P
Sbjct: 204 LSLKSLLENRRNNKYSRRNLPNPDNDNTSTITPQAAPNTNP 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,782
Number of Sequences: 59808
Number of extensions: 382695
Number of successful extensions: 1260
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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