Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120524.Seq
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.9  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 322 ILFIIKQVTKKFKTCNLGFHNYYKLFRRCLSMLLF 426
           ILF +      F  C++    Y+ L  RCL+ L+F
Sbjct: 364 ILFPVAGFISDFD-CDINSIQYFCLMARCLNTLIF 397


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 133 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 26
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 293 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 133 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 26
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 613 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 648


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 544 ITLSTTHICCAKT*TWP*KSG 606
           ++LST  + C  T  WP  +G
Sbjct: 77  VSLSTCSMLCGSTQLWPQPTG 97


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 35  RRIEIAHALCLTERQIKIWFQ 55


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 249 RRIEIAHALCLTERQIKIWFQ 269


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 249 RRIEIAHALCLTERQIKIWFQ 269


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 271 RRIEIAHALCLTERQIKIWFQ 291


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 249 RRIEIAHALCLTERQIKIWFQ 269


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 205 RRIEIAHALCLTERQIKIWFQ 225


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 249 RRIEIAHALCLTERQIKIWFQ 269


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 37  RRIEIAHALCLTERQIKIWFQ 57


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 273 RRIEIAHALCLTERQIKIWFQ 293


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 249 RRIEIAHALCLTERQIKIWFQ 269


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 186 RRIEIAHALCLTERQIKIWFQ 206


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 603 RRLLIKHEMLPTEKRIRLSFE 665
           RR+ I H +  TE++I++ F+
Sbjct: 245 RRIEIAHALCLTERQIKIWFQ 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,970
Number of Sequences: 336
Number of extensions: 4050
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)