Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120524.Seq
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052099-1|AAK93523.1| 1049|Drosophila melanogaster SD04748p pro...    31   1.6  
AE013599-1656|AAM68598.1| 1049|Drosophila melanogaster CG4062-PB...    31   2.2  
AE013599-1655|AAF58412.1| 1049|Drosophila melanogaster CG4062-PA...    31   2.2  
AE014297-2766|AAN13823.2|  386|Drosophila melanogaster CG31208-P...    30   3.8  

>AY052099-1|AAK93523.1| 1049|Drosophila melanogaster SD04748p
           protein.
          Length = 1049

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 298 AGADMGQQILFIIKQVTKKFKTCNLGFHNY--YKLFRRCLSMLLFKHKEVFIKCLQVILK 471
           A A + Q   +I+ ++    + CN GF +Y        C +  L+   +V+++CL+ I +
Sbjct: 768 ASATINQMDAWILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKPIFQ 827

Query: 472 A 474
           +
Sbjct: 828 S 828


>AE013599-1656|AAM68598.1| 1049|Drosophila melanogaster CG4062-PB,
           isoform B protein.
          Length = 1049

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 298 AGADMGQQILFIIKQVTKKFKTCNLGFHNY--YKLFRRCLSMLLFKHKEVFIKCLQVILK 471
           A A + Q   +I+ ++    + CN GF +Y        C +  L+   +V+++CL+ I +
Sbjct: 768 ASAAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKPIFQ 827

Query: 472 A 474
           +
Sbjct: 828 S 828


>AE013599-1655|AAF58412.1| 1049|Drosophila melanogaster CG4062-PA,
           isoform A protein.
          Length = 1049

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 298 AGADMGQQILFIIKQVTKKFKTCNLGFHNY--YKLFRRCLSMLLFKHKEVFIKCLQVILK 471
           A A + Q   +I+ ++    + CN GF +Y        C +  L+   +V+++CL+ I +
Sbjct: 768 ASAAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKPIFQ 827

Query: 472 A 474
           +
Sbjct: 828 S 828


>AE014297-2766|AAN13823.2|  386|Drosophila melanogaster CG31208-PA
           protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 307 DMGQQILFIIKQVTKKFKTCNLGFHNYYKLFRRCLSMLLFKHKEVFI 447
           D+  Q L + +QV+  FKT   GF    +L    L+++ F H++ ++
Sbjct: 112 DLINQFLRLFRQVSDLFKTKTPGFGGRRELILILLNLISFAHEQTYL 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,590,077
Number of Sequences: 53049
Number of extensions: 699987
Number of successful extensions: 1788
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)