Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120524.Seq
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-10|CAD56598.1|  349|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical...    28   6.0  
AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine re...    28   7.9  

>Z81586-10|CAD56598.1|  349|Caenorhabditis elegans Hypothetical
           protein T05F1.13 protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 522 AVTNALHYYIVDNPHLLCKDINVAIK 599
           A+T+ L  Y++ NP+L C +IN A++
Sbjct: 184 AITSDLLEYLLQNPNLFCLNINCAVR 209


>Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.11 protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = -2

Query: 590 HVYVFAQQMWVVDNVIVQSIRYGKCVVYLTTPLFLTGIAAFKIT 459
           HV+  A  +  V  VI  +I   KC+  L   +FLTGIAA +IT
Sbjct: 36  HVHFVALIVGTVLGVIHLTILTRKCMRALRINVFLTGIAAAEIT 79


>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical protein
            ZK757.3b protein.
          Length = 1037

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = -2

Query: 542  VQSIRYGKCVVY--------LTTPLFLTGIAAFKITCKHFMNTSLCLNNNMDKHRRNS 393
            +QSI YG C  Y        + TP++   + A +  C       L  NN+ D + R+S
Sbjct: 924  IQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCHVKRKLGLADNNDCDTNSRSS 981


>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical protein
            ZK757.3a protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = -2

Query: 542  VQSIRYGKCVVY--------LTTPLFLTGIAAFKITCKHFMNTSLCLNNNMDKHRRNS 393
            +QSI YG C  Y        + TP++   + A +  C       L  NN+ D + R+S
Sbjct: 927  IQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCHVKRKLGLADNNDCDTNSRSS 984


>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical protein
            ZK757.3b protein.
          Length = 1037

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = -2

Query: 542  VQSIRYGKCVVY--------LTTPLFLTGIAAFKITCKHFMNTSLCLNNNMDKHRRNS 393
            +QSI YG C  Y        + TP++   + A +  C       L  NN+ D + R+S
Sbjct: 924  IQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCHVKRKLGLADNNDCDTNSRSS 981


>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical protein
            ZK757.3a protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = -2

Query: 542  VQSIRYGKCVVY--------LTTPLFLTGIAAFKITCKHFMNTSLCLNNNMDKHRRNS 393
            +QSI YG C  Y        + TP++   + A +  C       L  NN+ D + R+S
Sbjct: 927  IQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCHVKRKLGLADNNDCDTNSRSS 984


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 181 RNVVGVNGGIRPKPVARDQSIFR 249
           +N VG N  I+P+PVA+ Q+I++
Sbjct: 595 QNTVGGNAYIQPQPVAQQQTIYQ 617


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 181 RNVVGVNGGIRPKPVARDQSIFR 249
           +N VG N  I+P+PVA+ Q+I++
Sbjct: 240 QNTVGGNAYIQPQPVAQQQTIYQ 262


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 181 RNVVGVNGGIRPKPVARDQSIFR 249
           +N VG N  I+P+PVA+ Q+I++
Sbjct: 192 QNTVGGNAYIQPQPVAQQQTIYQ 214


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 181 RNVVGVNGGIRPKPVARDQSIFR 249
           +N VG N  I+P+PVA+ Q+I++
Sbjct: 920 QNTVGGNAYIQPQPVAQQQTIYQ 942


>U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical
           protein C42D4.3 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +1

Query: 622 MKCCQPRNELDYRLKKCSKELKFRYTKS 705
           MKCC+ RN  D  L KCS      YTKS
Sbjct: 84  MKCCEDRNLPDSCLSKCSYR---SYTKS 108


>AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical
           protein R07C3.4 protein.
          Length = 723

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
 Frame = -1

Query: 585 LCLCTTNVGCRQCNSAKHSLRQMRSLFDDALVLDGHC---------GF*NYLQAFYEHLF 433
           L LC+T V C +    +  L    S    A V + HC          F N+L  F E  F
Sbjct: 281 LNLCSTTVACEEFEHVEGELDSYLSYLPLAHVYERHCTLAHFKIGSNFHNFLNKFVEVFF 340

Query: 432 VFKQ 421
            FK+
Sbjct: 341 FFKR 344


>AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein134 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 364 CNLGFHNYYKLFRRCLSMLLFKHKEVFI 447
           C++ FH YY  F++  +++L + +E F+
Sbjct: 4   CDIQFHQYYPKFQKKTAIILCRFQENFV 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,763
Number of Sequences: 27780
Number of extensions: 376754
Number of successful extensions: 931
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)