Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120522.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    27   0.15 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.8  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 232 RQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQSL 128
           R  LQ +  A ++ P R+F+C+ C  +  +SY  L
Sbjct: 62  RTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYNLL 96


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 13  MIRTSSHVLNVQENIMTSNCASSPYSCEATSAC 111
           M++     LNVQ   +T NCA+   S      C
Sbjct: 547 MLKNRFVTLNVQLTKLTKNCATKAQSVVLGRIC 579


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/47 (17%), Positives = 22/47 (46%)
 Frame = +2

Query: 491 LFCVLFKNINSMQMYVNELISNCLLFIEKLETINKTVKSYEFVRRQF 631
           + C+      ++ + + E + N   F +K+E +  ++K    +  +F
Sbjct: 165 IVCIFRGKYRNINLLLTEQLQNRRFFAKKMEGLVCSIKELNMIFNEF 211


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 52  NIMTSNCASSPYSCEATSACAEAQQVMID 138
           +I++   A   +S  A+ AC E + VM+D
Sbjct: 92  DILSGAIACIGFSWIASPACTELEVVMLD 120


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 680 IFLKPKECCEYAIC 721
           IF  PK C  Y +C
Sbjct: 565 IFSDPKNCAAYYVC 578


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 147 FLSHVHRRHTNRRKGAMRRAFGR 215
           F+SH+H    N+    +   FGR
Sbjct: 231 FMSHIHNDGDNKPDTILVNGFGR 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,352
Number of Sequences: 336
Number of extensions: 3911
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)