Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120522.Seq
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens ...    32   1.8  
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.                31   3.2  
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot...    31   3.2  
BC057227-1|AAH57227.1|  318|Homo sapiens Unknown (protein for IM...    31   3.2  

>AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45904 fis, clone OCBBF3026361. ).
          Length = 1063

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -2

Query: 324  EDGRVWQCRHIDHSNKKIYSL---FYIVH-FQMFIVNYCKRGRTHAALHLCVDLYV 169
            + GR++ C+H D +NK   S+   +  +H +  F   Y      H+A++ C++ Y+
Sbjct: 838  DSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYI 893


>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
          Length = 3259

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 515  INSMQMYVNELISNCLLFIEKLETINKTVKSYEFVRRQ 628
            +   Q  V +L  +C+ + EK+  + +TVK+ EFV+ +
Sbjct: 2014 LKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTE 2051


>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
          Length = 3225

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 515  INSMQMYVNELISNCLLFIEKLETINKTVKSYEFVRRQ 628
            +   Q  V +L  +C+ + EK+  + +TVK+ EFV+ +
Sbjct: 1980 LKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTE 2017


>BC057227-1|AAH57227.1|  318|Homo sapiens Unknown (protein for
           IMAGE:4702419) protein.
          Length = 318

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 515 INSMQMYVNELISNCLLFIEKLETINKTVKSYEFVRRQ 628
           +   Q  V +L  +C+ + EK+  + +TVK+ EFV+ +
Sbjct: 99  LKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTE 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,776,886
Number of Sequences: 237096
Number of extensions: 1850228
Number of successful extensions: 4579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4579
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)