Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120521.Seq
(745 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 104 6e-23
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 93 2e-19
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 76 3e-14
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 75 8e-14
08_01_0397 - 3509186-3510291,3510322-3512335 73 3e-13
03_05_0865 - 28365430-28367640 71 1e-12
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 64 1e-10
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 63 2e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 61 8e-10
06_03_1255 + 28780181-28781172,28782065-28782932 56 3e-08
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 55 5e-08
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 55 7e-08
02_01_0381 - 2764331-2764342,2768966-2769907 55 7e-08
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 54 2e-07
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 53 2e-07
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 53 2e-07
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 53 3e-07
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 52 5e-07
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 52 6e-07
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 52 6e-07
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 51 1e-06
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 50 1e-06
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 50 1e-06
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 49 3e-06
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 48 8e-06
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 48 1e-05
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 48 1e-05
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 46 2e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 46 4e-05
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 46 4e-05
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 44 1e-04
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 44 2e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 43 2e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 43 3e-04
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 42 4e-04
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 42 7e-04
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 42 7e-04
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 41 0.001
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 39 0.004
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 39 0.004
03_02_0189 - 6253659-6255380 39 0.005
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 38 0.006
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 38 0.006
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 38 0.008
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 37 0.015
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 37 0.015
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 37 0.019
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 35 0.059
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 34 0.14
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 34 0.14
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 33 0.24
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 32 0.55
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 31 0.73
02_01_0091 + 646299-649082 31 0.73
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 31 0.73
01_07_0205 - 41978437-41980599,41980805-41981215 31 0.97
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 31 0.97
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 31 0.97
01_01_0299 + 2451591-2451904,2452397-2452586 29 2.9
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 29 5.2
04_03_0835 + 20178224-20179483 28 6.8
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 28 9.0
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 9.0
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 9.0
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 104 bits (250), Expect = 6e-23
Identities = 44/90 (48%), Positives = 60/90 (66%)
Frame = +3
Query: 240 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 419
P+ F SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 420 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
Y Q + G+ EPTPIQ+QGWP+A+ G++
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRD 195
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFW 682
++++G+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + F
Sbjct: 194 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFG 253
Query: 683 TH 688
++
Sbjct: 254 SY 255
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFW 682
++L+G+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A F
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 188
Query: 683 THI 691
I
Sbjct: 189 VEI 191
Score = 88.6 bits (210), Expect = 5e-18
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +3
Query: 261 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 440
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 441 TMGYKEPTPIQAQGWPIAMSGKN 509
G+ EPTPIQ+QGWP+A+ G++
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRD 130
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 75.8 bits (178), Expect = 3e-14
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
++ +G+A+TGSGKTLA++LP + H+ +QPP+ GDGPI L++APTREL QI
Sbjct: 323 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQI 374
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ QPF KN Y + + EV YR N E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN 509
+K +G+++P PIQAQ PI MSG++
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRD 324
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 74.5 bits (175), Expect = 8e-14
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP +
Sbjct: 174 IEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNA 233
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN 509
+ GY++PT IQ Q PI +SG++
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGRD 258
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
++++G+A+TGSGKT A++LP IVHI +QP + + +GPI +V APTRELA QI A F
Sbjct: 257 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKF 315
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 72.5 bits (170), Expect = 3e-13
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
++ +G+A+TGSGKTLA++LP + H+ +QP + GDGPI L++APTREL QI
Sbjct: 462 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQI 513
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ QPF KNFY + K + EV YR E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN 509
+K +G+++P IQAQ PI MSG++
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRD 463
>03_05_0865 - 28365430-28367640
Length = 736
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 673
++++G+A+TGSGKT A++LP + +I PPI +GP A+V+APTRELAQQI++
Sbjct: 353 RDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETV 412
Query: 674 DFWTHI 691
F T++
Sbjct: 413 KFATYL 418
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRD 354
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 673
+++V +A+TGSGKTL Y++PA +H+ N P + GP LVLAPTRELA QIQ A
Sbjct: 642 RDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPTRELASQIQDEAV 697
Query: 674 DF 679
F
Sbjct: 698 KF 699
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
S++P ++ F P+ P++ + YR +HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
+ G+ PTPIQAQ WP+A+ ++ +A
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVA 646
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +3
Query: 330 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 497
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
+++V +A+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A F
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTRELATQILEEAVKF 245
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 330 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 510 *LA 518
+A
Sbjct: 220 IVA 222
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
+++V VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A F
Sbjct: 218 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKF 275
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 607
+ G+++ L + ++++G+A TGSGKTL ++LP I+ + PI G+
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGE 248
Query: 608 GPIALVLAPTRELAQQIQQVAADF 679
GP L++ P+RELA+Q +V F
Sbjct: 249 GPFGLIVCPSRELARQTHEVIEMF 272
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 473
P L+R P + R + + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 474 AQGWPIAMSGKN 509
QG P+A+SG++
Sbjct: 201 VQGLPVALSGRD 212
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 419 LCATRCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHI--NNQPP 592
LCA G Q + + + + ++ A TG+GKTLAY+ P IVH+ +P
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPR 92
Query: 593 IRRGDGPIALVLAPTRELAQQIQQVA 670
+ R DG ALVL PTREL Q+ +A
Sbjct: 93 VERTDGTFALVLVPTRELCLQVYGIA 118
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPTRELAQQIQQVAA 673
++ +G+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-VPRVLVLSPTRELAQQIADVLC 188
Query: 674 D 676
+
Sbjct: 189 E 189
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
P+ F P V K G++ P+PIQA WP + G++
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRD 131
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAA 673
++++G+A TGSGKTL ++LP I V + + PI G+GP +++ P+RELA+Q V
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIE 279
Query: 674 DF 679
F
Sbjct: 280 QF 281
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Frame = +3
Query: 228 EHASPRLGFVSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVEVH 380
EH S R +S++ K + DP P L+R P + +E R + V G +V
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 381 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
P + F + P+ + + ++ G +PTPIQ QG P+ +SG++
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRD 221
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
K++VG A+TG+GKTLA+ +P + I + G P+A+VLAPTRELA+Q+++ +D
Sbjct: 136 KDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVEREFSD 194
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Frame = +2
Query: 491 SYVWKELVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPTRELAQQ 655
S ++L+ AQTGSGKT A+ P I I + PP RG P+AL+L+PTREL+ Q
Sbjct: 357 SIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQ 416
Query: 656 IQQVAADF 679
I + A F
Sbjct: 417 IHEEARKF 424
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G++ +A
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 365
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = +2
Query: 491 SYVWKELVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPTRELAQQ 655
S ++L+ AQTGSGKT A+ P I I +++PP R RG P+AL+L+PTREL+ Q
Sbjct: 271 SIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQ 330
Query: 656 IQQVAADF 679
I + A F
Sbjct: 331 IHEEARKF 338
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G++ +A
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 279
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Frame = +2
Query: 491 SYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPTRELA 649
S ++L+ AQTGSGKT A+ P I I PP +R P+AL+L+PTREL+
Sbjct: 189 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248
Query: 650 QQIQQVAADF 679
QI + A F
Sbjct: 249 MQIHEEARKF 258
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
V SG EV P+ F E + + ++ Y PTP+Q PI+++G++ +A
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMA 197
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/55 (43%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
K+++G A+TG+GKTLA+ +P + I + G P+A++LAPTRELA+Q+++
Sbjct: 131 KDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK 185
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQ 664
++L+ A+TG+GKTLA+ +P I + + +RRG P LVLAPTRELA+Q+++
Sbjct: 168 RDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEK 224
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVA 670
+ L+ A TGSGKT ++++P I H ++ R D GP+A+VLAPTREL Q+++ A
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQA 277
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 324 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 503
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 504 KN 509
++
Sbjct: 220 RS 221
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 616
K G +R ++ + K++ A TGSGKTLA+++P + + +P + +
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVL 98
Query: 617 ALVLAPTRELAQQIQQVAADFW 682
++++PTREL+ QI VA F+
Sbjct: 99 GIIISPTRELSSQIYNVAQPFF 120
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +2
Query: 494 YVWKELVGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIA-LVLAPTRELAQQ 655
Y+ K+++ A+TG+GKT+A++LPAI ++ PPI + PI+ +V+ PTRELA Q
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQ 546
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/58 (44%), Positives = 41/58 (70%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
K+++G A+TGSGKTLA+++PAI +++ + R +G +V+ PTRELA Q VA +
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPTRELAIQTHNVAKE 190
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +2
Query: 434 CKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 613
C G++ A + + ++++G+A+TGSGKT A+ LP I+H + P G
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP-ILHRLGEDPY----GV 146
Query: 614 IALVLAPTRELAQQIQQ 664
AL LAPTRELA Q+ +
Sbjct: 147 AALALAPTRELAAQLAE 163
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINN--QPPIRR---GDGPIALVLAPTRELAQQI 658
+LVG A+TG GKTLA++LP + + N RR G P LVL PTRELA+Q+
Sbjct: 143 DLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQV 198
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 673
K++V A+TGSGKT AY+LP ++ ++ + IR+ P +L PTREL QQ+ A+
Sbjct: 121 KDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPTRELCQQVHNEAS 179
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F+E + +++ ++ G + TPIQ + P+ + GK+ +A
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVA 125
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--- 607
KD G +R + L K+++ A+TG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRP 81
Query: 608 GPIALVLAPTRELAQQI 658
LV+ PTRELA Q+
Sbjct: 82 SINLLVMCPTRELAIQV 98
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 616
KD G ++ + L ++++ A+TG+GKT+A++LPAI ++ P R
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP---RSPSIN 146
Query: 617 ALVLAPTRELAQQI 658
LV+ PTRELA Q+
Sbjct: 147 LLVICPTRELANQV 160
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G++ +A
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMA 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/62 (45%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILP-----------AIVHINNQPPIRRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A+ LP I H R P ALVLAPTRELA
Sbjct: 122 RDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELA 181
Query: 650 QQ 655
Q
Sbjct: 182 AQ 183
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +2
Query: 434 CKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 613
C G + + + + ++L+G+ QTGSGKT A+ LP I + Q +
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQD---KPQAL 112
Query: 614 IALVLAPTRELAQQIQQ 664
A VL+PTRELA QI Q
Sbjct: 113 FACVLSPTRELAFQIGQ 129
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +2
Query: 434 CKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 613
C+ G Q+ ++ + + +++ G A TGSGKT A+ LP + + +P +R
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP--KRVPAI 266
Query: 614 IALVLAPTRELAQQIQQV 667
L+L PTRELA Q+ +
Sbjct: 267 RVLILTPTRELAAQVHSM 284
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
F E N + + + +GY++PTPIQA P+A++G++
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRD 233
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
+++ A+TGSGKTLA+++PAI + P R G G +VL PTRELA Q VA +
Sbjct: 125 DVMASAKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCPTRELAIQTHNVAKE 180
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQI 658
++++GV QTGSGKT A+ LP I Q + P A VLAPTRELA QI
Sbjct: 21 RDVIGVGQTGSGKTAAFALPII-----QALLEHEHRPCFFACVLAPTRELAIQI 69
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 339 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 506
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 655
+E A TGSGKTLA++ P ++ I +P + +G A++L PTRELA Q
Sbjct: 184 RECFACAPTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTRELAAQ 230
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 670
++ +A+TGSGKT A+++P I + G G AL+L+PTR+LA Q + A
Sbjct: 65 DIAAMARTGSGKTAAFLVPMIQRLRRHD---AGAGIRALILSPTRDLATQTLKFA 116
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 503
FE + V +GV+ GY+ PTPIQ + P+ ++G
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG 63
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGP 613
D G +T + L K+++ A+TG+GK+ A++LPAI + N + P
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSP 418
Query: 614 I-ALVLAPTRELAQQI 658
I +L+L PTRELA Q+
Sbjct: 419 IFSLILCPTRELAIQL 434
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 619
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ + +
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEK-----NAIQV 205
Query: 620 LVLAPTRELAQQIQQVAADFWTHI 691
++L PTRELA Q QV + H+
Sbjct: 206 VILVPTRELALQTSQVCKELGKHL 229
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*LKRVPAK 542
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 619
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ +
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDK-----NAIQV 195
Query: 620 LVLAPTRELAQQIQQVAADFWTHI 691
++L PTRELA Q QV + H+
Sbjct: 196 VILVPTRELALQTSQVCKELGKHL 219
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*LKRVPAK 542
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 15/73 (20%)
Frame = +2
Query: 485 ADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGD----------GPI-A 619
A ++ K+++G A+TGSGKTLA+ LP + + + + R D P+ A
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRA 234
Query: 620 LVLAPTRELAQQI 658
L+L PTRELA+Q+
Sbjct: 235 LILTPTRELAKQV 247
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 435 VKTMGYKEPTPIQAQGWPIA 494
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 521 AQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 670
AQTGSGKTLAY+L I+ + ++ ALV+ PTREL Q+ +VA
Sbjct: 85 AQTGSGKTLAYLLSVFSAIDFGRSSVQ------ALVVVPTRELGMQVTKVA 129
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 414 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
P++V Q + +GY PT +Q Q P+ +SG++
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQD 80
>03_02_0189 - 6253659-6255380
Length = 573
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVHIN--NQPPIRRG----DGPIALVLAPTRELAQQI 658
TGSGKTLAY+LP + I +P + G G A+++AP+REL QI
Sbjct: 177 TGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQI 226
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/84 (25%), Positives = 41/84 (48%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 619
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ + +
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEK-----NAIQV 218
Query: 620 LVLAPTRELAQQIQQVAADFWTHI 691
++L PTRELA Q QV + ++
Sbjct: 219 VILVPTRELALQTSQVCKELGKYL 242
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*LKRVPAK 542
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQI 658
TGSGKTLAY+LP + I Q + G A+++AP+REL QI
Sbjct: 639 TGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQI 688
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAPTRELAQQI 658
Q+GSGKTLAY+ P + ++ + + R P +VL PT ELA Q+
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 500 WKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
+K+L+ A GSGKT ++L + ++ + + A+ + PTRELAQQ + V
Sbjct: 140 YKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQ-----AICICPTRELAQQNKSV 190
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
TGSGKTLAY LP + + R+ ALV+ PTR+LA Q+++V
Sbjct: 83 TGSGKTLAYALPIVQML----ATRKVRCLRALVVLPTRDLALQVKEV 125
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHI---------NNQPPIR 598
GL R ++ + +++ A+TGSGKT Y++P I + N +
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVT 160
Query: 599 RGDGPIALVLAPTRELAQQIQQVA 670
G IALVL P L +Q+ ++A
Sbjct: 161 SGSPNIALVLCPNVMLCEQVVRMA 184
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 35.1 bits (77), Expect = 0.059
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 25/81 (30%)
Frame = +2
Query: 521 AQTGSGKTLAYILPAI----------VHINNQPP-----IRRGDG----------PIALV 625
+ TGSGKTLAY+LP + + INN P +RR + P A+V
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIENTYRLLPINNGVPANQKLLRRDEAMLGMSMKPRRPRAVV 213
Query: 626 LAPTRELAQQIQQVAADFWTH 688
L PTREL +Q+ +VA H
Sbjct: 214 LCPTRELTEQVFRVAKSISHH 234
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 503
+ FEE + V + MG +PT IQ G P ++G
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAG 147
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 33.9 bits (74), Expect = 0.14
Identities = 11/23 (47%), Positives = 21/23 (91%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIV 571
++++G A+TGSGKTLA+++P ++
Sbjct: 118 RDVLGAAKTGSGKTLAFVIPVLM 140
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
+++ AQ+G+GKT + + ++ + ALVLAPTRELAQQI++V
Sbjct: 80 DVIQQAQSGTGKTATFCSGILQQLDYAVVECQ-----ALVLAPTRELAQQIEKV 128
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 512 VGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVAADF 679
+ V TGSGKT+ ++ A H +R G+ P I + LAPT L Q +V ++
Sbjct: 56 IAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVIREY 110
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
+++ AQ+G+GKT + + ++ + +LVLAPTRELAQQI++V
Sbjct: 80 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQ-----SLVLAPTRELAQQIEKV 128
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + ++++ AQ+G+GKT L ++ +R AL+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALI 104
Query: 626 LAPTRELAQQIQQV 667
L+PTRELA Q ++V
Sbjct: 105 LSPTRELAAQTERV 118
>02_01_0091 + 646299-649082
Length = 927
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G+ + A+ + + + + +V T SGK+L Y +P + I+ + P AL
Sbjct: 184 GVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS------QSSAPCALY 237
Query: 626 LAPTRELAQ 652
+ PT+ LAQ
Sbjct: 238 IFPTKALAQ 246
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + ++++ AQ+G+GKT L ++ +R AL+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALI 104
Query: 626 LAPTRELAQQIQQV 667
L+PTRELA Q ++V
Sbjct: 105 LSPTRELAAQTERV 118
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 419 LCATRCKDNGLQRTDAYSSSRLADSYVWK--ELVGVAQTGSGKTLAYILPAIVHINNQPP 592
L TR +N + AY +LAD YVW + + + G+ L +I A+V I++ P
Sbjct: 243 LMTTR-SENKSSTSRAYYLGKLADEYVWSIAKQIAFVKEEEGQDLVHIKEAVVTISDGIP 301
Query: 593 I 595
+
Sbjct: 302 L 302
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
+++ A++G GKT ++L ++ I+ P+ G ALVL TRELA QI
Sbjct: 75 DVICQAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQI 120
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
+++ A++G GKT ++L ++ I+ P+ G ALVL TRELA QI
Sbjct: 62 DVICQAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQI 107
>01_01_0299 + 2451591-2451904,2452397-2452586
Length = 167
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +2
Query: 425 ATRCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG 604
AT Q A R +Y + G+A T G + ++ A V +++ P RRG
Sbjct: 22 ATTLATAAFQPPPAPGGLRTTTTYNHLAVAGLAGTFLGGVV--LVGASVWVSDNPAARRG 79
Query: 605 DGPIALVLAPTRELAQQIQQVAADFW 682
G L A LA + VAA W
Sbjct: 80 TGKKLLYAAVPMLLAAVVLSVAALLW 105
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 232 MRRPDWDSFHSNLSTKTFMIHILQFSKDHH 321
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>04_03_0835 + 20178224-20179483
Length = 419
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 443 NGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-- 616
NGL+ T A +SSR A+ Y + L Q G +++ A +P + R D P
Sbjct: 250 NGLRDTAAIASSRAAELYGMEVLADGIQDDCGNVTRFVMLA-----REPIVPRTDRPFKT 304
Query: 617 ALVLAPTRELAQQIQQVAADF 679
++V A +E + +V + F
Sbjct: 305 SIVFAHDKEGTSVLFKVLSAF 325
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ-QIQQVAA 673
++++ + G GK+L Y LPA++H DG I LV++P L Q Q+ +AA
Sbjct: 121 RDVLVIMAAGGGKSLCYQLPAVLH----------DG-ITLVVSPLLSLIQDQVMGLAA 167
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 273 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 395
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 315 SPYEVEEYRNNHEVTVSGVEVHN 383
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,866,071
Number of Sequences: 37544
Number of extensions: 392611
Number of successful extensions: 1059
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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