Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120521.Seq
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    48   2e-07
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   1.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.9  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   4.3  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   5.7  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   10.0 

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 48.4 bits (110), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
 Frame = +2

Query: 503 KELVGVAQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQIQQVAAD 676
           ++L+  AQTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI      
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRK 271

Query: 677 F 679
           F
Sbjct: 272 F 272



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++ +A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 104 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 223
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -1

Query: 280  FLLKGWSETNPNL---GDACSDLQRILF----SHQILQILQIYCH 167
            F+ KG  E +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 500 WKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 610
           +K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 16/70 (22%), Positives = 26/70 (37%)
 Frame = +3

Query: 225 SEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 404
           SE     +   +++P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 405 ANFPDYVQQG 434
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 303 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 395
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,787
Number of Sequences: 2352
Number of extensions: 15262
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)