Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120521.Seq
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 77 2e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 52 3e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 52 3e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 52 3e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 48 7e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 48 7e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 46 4e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 46 4e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 45 5e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 45 7e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 45 7e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 7e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 45 7e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 44 9e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 44 9e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 44 9e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 44 1e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 2e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 3e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 40 0.002
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.002
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 0.002
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.002
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.053
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.28
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.86
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 0.86
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 0.86
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.5
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.1
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +3
Query: 258 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 437
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 438 KTMGYKEPTPIQAQGWPIAMSGKN 509
+++PT IQ+ WPIAMSG++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRD 168
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/59 (54%), Positives = 48/59 (81%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN*LA*LK----RVPAKRWP 551
++ Y++PTPIQA P A+SG++ L K + A WP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/59 (55%), Positives = 46/59 (77%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 431
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN 509
+K Y +PT IQAQ P MSG++
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRD 343
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 670
++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 671 ADF 679
F
Sbjct: 399 NKF 401
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 607
+ NG ++ S ++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 608 ---GPIALVLAPTRELAQQIQ 661
P LVL+PTRELAQQI+
Sbjct: 160 QKPSPFVLVLSPTRELAQQIE 180
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 410
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 411 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN 509
+ G ++ G+++P+PIQ+Q WP+ +SG++
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 607
K G+ A + + ++++G+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 608 GPIALVLAPTRELAQQI 658
GP L++ P+RELA+QI
Sbjct: 266 GPFGLIIVPSRELARQI 282
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 652
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 653 QIQQVAADF 679
QI + A F
Sbjct: 237 QIHKEATKF 245
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 652
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 653 QIQQVAADF 679
QI + A F
Sbjct: 221 QIHKEATKF 229
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 652
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 653 QIQQVAADF 679
QI + A F
Sbjct: 218 QIHKEATKF 226
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
+++G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 626 LAPTRELAQQIQQV 667
+APTRELAQQIQ+V
Sbjct: 103 MAPTRELAQQIQKV 116
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 626 LAPTRELAQQIQQV 667
+APTRELAQQIQ+V
Sbjct: 103 MAPTRELAQQIQKV 116
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +2
Query: 434 CKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 613
C+ G + + L + K+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 614 IALVLAPTRELAQQIQQ 664
LVL PTRELA QI Q
Sbjct: 114 FCLVLTPTRELAFQIGQ 130
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIAL 622
G ++ + S ++ + K ++G A+TGSGKT A+++P + + + G GP A+
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAV 167
Query: 623 VLAPTRELAQQIQQV 667
++APT+EL QI ++
Sbjct: 168 IIAPTKELITQIYKL 182
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 670
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 671 ADF 679
F
Sbjct: 396 RKF 398
Score = 34.7 bits (76), Expect = 0.070
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 670
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 671 ADF 679
F
Sbjct: 396 RKF 398
Score = 34.7 bits (76), Expect = 0.070
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 616
KDN + +A S ++VG A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 617 ALVLAPTRELAQQ 655
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 674 DF 679
F
Sbjct: 440 KF 441
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 674 DF 679
F
Sbjct: 440 KF 441
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
K+++ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 674 DF 679
F
Sbjct: 440 KF 441
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 674 DF 679
F
Sbjct: 651 KF 652
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 674 DF 679
F
Sbjct: 651 KF 652
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAA 673
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 674 DF 679
F
Sbjct: 651 KF 652
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 664
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 619
+ G ++ + + + ++++ A+ G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 620 LVLAPTRELAQQIQQVAADFWTHI 691
+V+ PTRELA Q Q+ + HI
Sbjct: 115 MVIVPTRELALQTSQICVELSKHI 138
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
V +G +V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 650 QQI 658
QI
Sbjct: 264 LQI 266
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFW 682
K++ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLS 243
Query: 683 THI 691
T I
Sbjct: 244 TFI 246
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
FE+ N + + GY +PTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 679
++V + TGSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
K++V +++TGSGKT A+++P + + R G AL+++PTRELA Q +V +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKE 115
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 676
K++V +++TGSGKT A+++P + + R G AL+++PTRELA Q +V +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKE 115
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + ++++ AQ+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 626 LAPTRELAQQIQQV 667
L+PTRELA QIQ+V
Sbjct: 100 LSPTRELAVQIQKV 113
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 655
++V A TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 655
++V A TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +2
Query: 431 RCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPA---IVHINNQPPIRR 601
R +N +++ + + ++ A TGSGKTLA+ LP I+ + +
Sbjct: 140 RLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSS 199
Query: 602 GDGP--IALVLAPTRELAQQ 655
+ +A+VL PTRELA Q
Sbjct: 200 SNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 35.1 bits (77), Expect = 0.053
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
L+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 251 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 298
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 35.1 bits (77), Expect = 0.053
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
L+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 276 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 323
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.053
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 667
L+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 660 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 707
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
+++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 521 AQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 658
A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 98 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 214
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/78 (21%), Positives = 43/78 (55%)
Frame = +2
Query: 431 RCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 610
R K++ R + + + ++++ A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 611 PIALVLAPTRELAQQIQQ 664
+++ PTRE++ QI++
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/78 (21%), Positives = 43/78 (55%)
Frame = +2
Query: 431 RCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 610
R K++ R + + + ++++ A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 611 PIALVLAPTRELAQQIQQ 664
+++ PTRE++ QI++
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVH 574
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 500 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 321
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 320 W*SFENCRMWIIKVF 276
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 226 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 125
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,623
Number of Sequences: 27780
Number of extensions: 340655
Number of successful extensions: 1090
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -