Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120520X.Seq
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 108 1e-22
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 86 6e-16
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 85 1e-15
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 80 3e-14
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 75 1e-12
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 64 2e-09
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 51 2e-05
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 50 5e-05
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 6e-05
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 8e-05
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 46 5e-04
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 43 0.004
UniRef50_Q4U9U6 Cluster: Peptidase, putative; n=2; Theileria|Rep... 36 0.64
UniRef50_Q9XTW0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_Q580W3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A5ANR2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_A3LSL3 Cluster: Predicted protein; n=1; Pichia stipitis... 33 6.0
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 108 bits (259), Expect = 1e-22
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 210 KMVLPIFDEDDNQFK 254
KMVLPI+DEDDNQ+K
Sbjct: 60 KMVLPIYDEDDNQYK 74
Score = 96.3 bits (229), Expect = 4e-19
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHLIY+N VN IC +LK
Sbjct: 76 TIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHLIYDNRLEVNRICASLK 135
Query: 437 YTAVSQAARNGYTQRLRNYKKHSRT-TNPNTFCSRVSRDEL 556
+ + + ++ + T+P +CSRV+ D++
Sbjct: 136 NNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVANDDV 176
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 85.8 bits (203), Expect = 6e-16
Identities = 41/70 (58%), Positives = 49/70 (70%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 210 KMVLPIFDED 239
KMVLPI D D
Sbjct: 60 KMVLPIPDAD 69
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +2
Query: 245 SIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 424
++ T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+IY N+ IC
Sbjct: 72 ALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHIIYENDVERERIC 131
Query: 425 DNLKYTAVSQAARNGYTQRLRNYKKHSRT----TNPNTFCSR 538
L+ +S+ N + + + PN +CSR
Sbjct: 132 QMLE---ISERFENDTYKVVDTINARTSAIMAMVTPNRYCSR 170
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 210 KMVLPIFDEDDNQFK*RSLG 269
KMVLPI D + + RS+G
Sbjct: 59 KMVLPIPDAEGTIYN-RSVG 77
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
++ + L+ E R+LIP+ TNY++V L SM EQLIFH+IY+ + N IC L+
Sbjct: 75 SVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHMIYDEPDKQNEICKLLQ 132
Query: 437 YTAVSQAARNGYTQRLRNYKKH-SRTTNPNTFCSRVS 544
Y + +R+ N TNP FC+RV+
Sbjct: 133 YNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVN 169
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 210 KMVLPIFDEDDNQFK*RSLG 269
KMVLPI D + N + R++G
Sbjct: 60 KMVLPIPDAEGNIYN-RTVG 78
Score = 72.1 bits (169), Expect = 8e-12
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+IY+N EA +C L+
Sbjct: 76 TVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHMIYDNVEAQGAVCKALQ 135
Query: 437 YTAVSQAARNGYTQRLRNYKKH-SRTTNPNTFCSRVS 544
+ Q + + N TNP +CS+V+
Sbjct: 136 HNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVN 172
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 209
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 210 KMVLPIFDEDDNQFK*RSLG 269
KM L I D DN+ R++G
Sbjct: 60 KMSLAIPDA-DNKVLFRTVG 78
Score = 70.1 bits (164), Expect = 3e-11
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 257 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+IY N E IC+ LK
Sbjct: 76 TVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHMIYENLEKQKEICERLK 135
Query: 437 YTAVSQAARNGYTQRL-RNYKKHSRTTNPNTFCSRVSRDEL 556
+T A R Q+L N NP+ FC+ VS L
Sbjct: 136 FTE-HFADRYKNVQKLYSNTMSVLNMANPDHFCAEVSLTSL 175
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +2
Query: 242 QSIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVI 421
Q + + + LV + R RILIP+ NYQ V N++ + AE+L+ HLIYNN A I
Sbjct: 73 QKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVLHLIYNNRTAAAEI 132
Query: 422 CDNLKYTAVSQAARNGYTQRLRNYK-KHSRTTNPNTFCSRVSRDEL 556
C+ L+ + R+ + + + + + T+P FCS V+ +++
Sbjct: 133 CNQLRQ---QENFRSDVVENVTSMAYRIIQITDPEAFCSVVASNDI 175
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 30 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 203
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 204 MSKMVLPIFD 233
+ K + I D
Sbjct: 60 IEKTSIAIPD 69
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 45 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 206
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 207 SKMVLPIFDEDDNQ 248
K I DN+
Sbjct: 63 LKSSFRIPSGKDNK 76
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 49.6 bits (113), Expect = 5e-05
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 51 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 221
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 222 PIFDEDDNQFK 254
I FK
Sbjct: 62 EIPSGTGTSFK 72
Score = 34.7 bits (76), Expect = 1.5
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 245 SIQMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA----- 409
S ++ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 70 SFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGESATEPTGL 127
Query: 410 VNVICDNLK 436
+ +C++L+
Sbjct: 128 ITQLCESLR 136
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRI 63
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 8e-05
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +2
Query: 302 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 436
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 227
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 75 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 239
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 240 DNQFK 254
+ FK
Sbjct: 72 NRSFK 76
>UniRef50_Q4U9U6 Cluster: Peptidase, putative; n=2; Theileria|Rep:
Peptidase, putative - Theileria annulata
Length = 772
Score = 35.9 bits (79), Expect = 0.64
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +2
Query: 266 RHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTA 445
+H + + R+L + +Y +VF+ + ++ ++ I + + + + L Y+
Sbjct: 273 KHFISLFKSKSGRVLFMATVSYNKVFSAYMITKSGKMFTVPIVSGSKLMLEYRNGLVYSV 332
Query: 446 VSQAARNGYTQRLRNYK-----KHSRTTNPNTFCSRV 541
S N YT LRN + K+ ++ N + FC R+
Sbjct: 333 YSDVVSNIYTNSLRNLRAFKSMKNDKSNNGSNFCGRI 369
>UniRef50_Q9XTW0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 358
Score = 35.5 bits (78), Expect = 0.85
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 356 MMQAEQLIFHLIYNNEEAVNVICDNLKYTAVSQAARNGYTQRLRNYKKHSRTTNPNTFCS 535
M + +L H Y+ + V + NL Y+ + ++R L ++ S T + NTF
Sbjct: 222 MFEQAKLGRHKSYSGSQCVKLYIPNLSYSNSTSSSRASSVDSLASFNSQSSTDSQNTFRK 281
Query: 536 RVSRDEL 556
RD+L
Sbjct: 282 NGGRDQL 288
>UniRef50_Q580W3 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 706
Score = 34.7 bits (76), Expect = 1.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 398 NEEAVNVICDNLKYTAVSQAARNGYTQRLRNYKKHSRTTNPN 523
NE A ICDN K TA+ A NGY + R KH P+
Sbjct: 525 NEGADAYICDNAKCTALYYAIANGYAEAARILLKHFPDLRPS 566
>UniRef50_A5ANR2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 638
Score = 33.5 bits (73), Expect = 3.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +2
Query: 323 TNYQEVFNLNSMMQAEQLIFHLIY-----NNEEAVNVICD--NLKYTAVSQAARNGYTQR 481
TN +V++LNS +Q F Y N + +N++ N VS A++G
Sbjct: 409 TNGAQVYSLNSCSHLQQDXFKATYMFVWSNGDADINLVQSVINPDTRLVSLMAKSGNNGL 468
Query: 482 LRNYKKHSRTTNPNTFCS 535
+ H+R+TNP CS
Sbjct: 469 ITRINTHARSTNPAVKCS 486
>UniRef50_A3LSL3 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 763
Score = 32.7 bits (71), Expect = 6.0
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +1
Query: 121 HTSHRVRPTRIMTTDGLSATATSSNVLKC-------QKWFCPFSTKTTINSNDDR*AF 273
H S + R TR M G++AT +L C + W C F K+ +N+N R F
Sbjct: 411 HHSSKKRITRSMDESGIAATEDEFKLLSCFTLGPDIKTWTCEFLPKSGLNANSTRPQF 468
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,974,912
Number of Sequences: 1657284
Number of extensions: 10233868
Number of successful extensions: 23113
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23101
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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