Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120520X.Seq
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.1  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   5.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = +2

Query: 416 VICDNLKYTAVSQAARNGYTQRLRNYKKHSRTTNPNTFCSRVSR 547
           ++C  +KY        + Y        +H     P T+CS  SR
Sbjct: 111 LLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPLTYCSWTSR 154


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 96  IVSFDACITYKSPCSPD 146
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 114 CITYKSPCSPD 146
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 63  VAAPYPRALAPYCCRYKY 10
           VAA +PR   P  C+Y Y
Sbjct: 179 VAATHPRYADPDDCQYFY 196


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 435 NIPQFHKRHATVIHSVYATTRSILEPQ 515
           N P +HK      H+V  TT   L PQ
Sbjct: 438 NHPVYHKDPHYGFHNVTNTTLQNLTPQ 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,575
Number of Sequences: 336
Number of extensions: 2776
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)