Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120520X.Seq
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016964-1|AAH16964.1|  343|Homo sapiens MAS-related GPR, member...    29   8.4  
AK098317-1|BAC05284.1|  304|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AK075450-1|BAC11628.1|  343|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AB065785-1|BAC45261.1|  328|Homo sapiens seven transmembrane hel...    29   8.4  

>BC016964-1|AAH16964.1|  343|Homo sapiens MAS-related GPR, member F
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 324 VALGIKIRLIPLSLFPTKCLAIVI*IDCRLRRK 226
           + LGI + L+   L    CLA+++ ++CR RR+
Sbjct: 199 IFLGILLFLLCCPLMVLPCLALILHVECRARRR 231


>AK098317-1|BAC05284.1|  304|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40998 fis, clone UTERU2016157, highly similar to
           PROBABLE G PROTEIN-COUPLED RECEPTOR RTA. ).
          Length = 304

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 324 VALGIKIRLIPLSLFPTKCLAIVI*IDCRLRRK 226
           + LGI + L+   L    CLA+++ ++CR RR+
Sbjct: 160 IFLGILLFLLCCPLMVLPCLALILHVECRARRR 192


>AK075450-1|BAC11628.1|  343|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0142 fis, clone PLACE1006269, highly similar to
           PROBABLE G PROTEIN-COUPLED RECEPTOR RTA. ).
          Length = 343

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 324 VALGIKIRLIPLSLFPTKCLAIVI*IDCRLRRK 226
           + LGI + L+   L    CLA+++ ++CR RR+
Sbjct: 199 IFLGILLFLLCCPLMVLPCLALILHVECRARRR 231


>AB065785-1|BAC45261.1|  328|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 324 VALGIKIRLIPLSLFPTKCLAIVI*IDCRLRRK 226
           + LGI + L+   L    CLA+++ ++CR RR+
Sbjct: 184 IFLGILLFLLCCPLMVLPCLALILHVECRARRR 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,292,200
Number of Sequences: 237096
Number of extensions: 1499643
Number of successful extensions: 2291
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2291
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)