Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120518.Seq
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.42 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   6.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.1  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 152 RRLLRYPRSPVNLDRLNISLFEELVVFCHAV*PTRRGA-PRPGEVSSP 292
           R +L YP++ +N    ++SL +   +F H   P R  A P   E+ SP
Sbjct: 33  RPMLPYPQNYINSYLFSLSLAQNNQLFTHHKAPIRPVALPPKREIPSP 80


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEKYKNV 320
           LR  W +V   +  + VP+   +  ++ D   +KN+
Sbjct: 390 LREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFKNM 425


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEKYKNV 320
           LR  W +V   +  + VP+   +  ++ D   +KN+
Sbjct: 390 LREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFKNM 425


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEKYKNV 320
           LR  W +V   +  + VP+   +  ++ D   +KN+
Sbjct: 390 LREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFKNM 425


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEKYKNV 320
           LR  W +V   +  + VP+   +  ++ D   +KN+
Sbjct: 390 LREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFKNM 425


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEKYKNV 320
           LR  W +V   +  + VP+   +  ++ D   +KN+
Sbjct: 389 LREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFKNM 424


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 508 CGVCVGGIHRRHRPVAHGGG 567
           C  C G   RRH  V H  G
Sbjct: 249 CDKCRGRFRRRHHLVHHKCG 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,069
Number of Sequences: 336
Number of extensions: 3128
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)