Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120518.Seq
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 155 3e-38
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 49 4e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 45 5e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 3e-04
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.017
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.022
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.039
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.052
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.21
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 33 0.28
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 32 0.37
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.37
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.37
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 32 0.48
SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 31 0.84
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.9
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.6
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.6
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.4
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 29 4.5
SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43) 29 4.5
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2) 28 7.9
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 7.9
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 155 bits (376), Expect = 3e-38
Identities = 73/133 (54%), Positives = 94/133 (70%)
Frame = +3
Query: 255 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 434
AVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSMQGL KFGFY
Sbjct: 72 AVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLGKFGFY 131
Query: 435 EVFKVAYAGMLDDETAYTYRTFVYXXXXXXXNSSPTSPCRPWRRLRSVSKTMPGFASTLR 614
EVFK+ Y ML +E +Y YRT +Y P ++ +T PG+A TLR
Sbjct: 132 EVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLR 191
Query: 615 EGVAEDGQERRLR 653
EGV + +E +R
Sbjct: 192 EGVPKLMKEEGIR 204
Score = 61.3 bits (142), Expect = 7e-10
Identities = 34/77 (44%), Positives = 41/77 (53%)
Frame = +1
Query: 37 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFAXX 216
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+A
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 217 XXXXXXSCGLTHTPWCP 267
SCGLTHT P
Sbjct: 59 GFGGILSCGLTHTAVVP 75
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 264 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 440
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 441 FKVAYAGMLD 470
K A+ D
Sbjct: 69 CKKAFGEFYD 78
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 264 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 431
PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + + +F
Sbjct: 701 PLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAV 760
Query: 432 YEVFKVA-YAGM 464
YEV K A YA M
Sbjct: 761 YEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Frame = +3
Query: 255 AVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 416
AV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 930 AVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKA 989
Query: 417 CK 422
K
Sbjct: 990 IK 991
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 392
P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 320 PADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 386
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 437
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 438 VFK 446
+ +
Sbjct: 94 LVR 96
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 264 PLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTFIGYSMQGLCKF 425
PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + ++ Q F
Sbjct: 126 PLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCPQVAVMF 185
Query: 426 GFYEVFK 446
YEV K
Sbjct: 186 AVYEVVK 192
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 264 PLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIGYSMQGLCKF 425
PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++ Q F
Sbjct: 192 PLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVCPQVAIMF 251
Query: 426 GFYEVFK 446
G YEV K
Sbjct: 252 GVYEVTK 258
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +3
Query: 264 PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 431
PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + ++ GF
Sbjct: 84 PLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--TIVPAMGIGF 141
Query: 432 YEVFKVAYAGMLDDETAYT 488
Y +F+ A L+ A+T
Sbjct: 142 Y-MFETMKAYFLETRIAFT 159
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.5 bits (78), Expect = 0.039
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 398
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 399 YSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYXXXXXXXNSSPTSP 548
++ + G YE K G D +A ++ V S+ +P
Sbjct: 86 QAIYSSTRLGAYEPIK-NLLGATDSTSAALWKKIVAGVSSGVIGSAIATP 134
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +3
Query: 264 PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 389
P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 134 PTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 422
P+D+V+ R + Y+ ++ +VR EG+ L KG+ P + + +
Sbjct: 231 PVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTRTGLDTIII 290
Query: 423 FGFYEVFKVAYAGM 464
F YE + YAG+
Sbjct: 291 FFVYERLR-RYAGL 303
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 AVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 431
++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 247 SIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAV 306
Query: 432 YEVFKVAYAGMLDDETA 482
YE K Y +++A
Sbjct: 307 YETLKNFYLNYHKNQSA 323
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 255 AVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 395
A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 344 ASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +3
Query: 258 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 398
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 255 AVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 395
A PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 178 ATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 AVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFG 428
+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I +F
Sbjct: 51 SVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFA 110
Query: 429 FYEVFKVAYA 458
YE +K A
Sbjct: 111 AYEEYKKGIA 120
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 285 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 440
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTFIGYSMQGLCKF 425
PLD+V+ RL V +++ N G ++R EEG+RGL KG P+ + + +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQ 107
Query: 426 GFYEVFKV 449
Y++ K+
Sbjct: 108 SVYDIMKL 115
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 395
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +3
Query: 264 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 377
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)
Frame = +3
Query: 258 VVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKGWAPT 389
++P D++K R+QV ++Y V + F+ ++EEG GL KG AP+
Sbjct: 47 ILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKGLAPS 101
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 258 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 395
V P +++K RL V YK + + K +REEG+ L KG P+F+
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 239 HDRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 84
H P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 811 HSLLHPPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 258 VVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 389
+ PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 155 LTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 228 CSVMRSDPHAVV--PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 401
C +M +VV P D+VK RLQ++ Y + + G+ GL +G P +
Sbjct: 529 CGIMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRR 588
Query: 402 SMQGLCKFGFYE 437
++ + YE
Sbjct: 589 TLMSAMAWTIYE 600
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 255 AVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 419
A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P + +
Sbjct: 110 ASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVL 169
Query: 420 KFGFYE 437
F F E
Sbjct: 170 TFIFLE 175
>SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 269 EGHHGVWVRPHDRTPPTPQRAKYLGD--PNSQDSVGTAADAAMPPVCSIATGATVD 108
+G V VRPHD+ P Q+++Y+ D NS + + A P V S +D
Sbjct: 32 QGVRLVAVRPHDQVSPRQQQSQYIHDLLNNSYPIIPKVGEPASPYVSSPRESVLID 87
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 269 EGHHGVWVRPHDRTPPTPQRAKYLGD--PNSQDSVGTAADAAMPPVCSIATGATVD 108
+G V VRPHD+ P Q+++Y+ D NS + + A P V S +D
Sbjct: 1613 QGVRLVAVRPHDQVSPRQQQSQYIHDLLNNSYPIIPKVGEPASPYVSSPRESVLID 1668
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 531 SSPTSPCRPWRRLRSVSKTMPGFASTLREGVAEDGQE 641
+S SPC WRR + +SK P + S E ++G+E
Sbjct: 261 ASSQSPCSYWRRTQVLSKIGPKYTSLSNETWKKNGKE 297
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 255 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 380
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 416
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 417 CKFGFYEV 440
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 264 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 416
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 191 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 30
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 105 PVDGRARGYRADRWHGGVCCG 167
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 419
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 420 KFGFYEVFK 446
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 434
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 103 CQSTVAPVAIEQTGGMAASAAVPTES 180
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 264 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 395
PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 89 PLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43)
Length = 493
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -1
Query: 236 DRTPPTPQRAKYLGDPNSQDSV--GTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEFR 63
D TP +A DP + S+ + A +C V + W G+S R+ FR
Sbjct: 424 DGTPNVLDKASMFIDPRDEVSIRDNSGRVALQVVICVAKLHVVVHFAWTGESNSRDFHFR 483
Query: 62 A 60
A
Sbjct: 484 A 484
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 366 LAKGWAPTFIGYSMQGLCKFGFYEVFKV 449
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 48 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 182
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2)
Length = 454
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 251 WVRPHDRTPPTPQRAKY 201
W+RP+ R PP P+ KY
Sbjct: 212 WLRPNGRKPPNPRPLKY 228
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 285 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 440
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +3
Query: 213 LRSWWCSVMRSDPHAVVPLDLVKCRLQVDAEK---YKNVVNGFKVSVREEGVR--GLAKG 377
+R WW ++ S P + VKC L EK + + G +++ EG + G A G
Sbjct: 582 VRQWWDTLQSSGPDLGYFPNAVKCWLVTKPEKEESARKIFEGTGINITTEGRKHLGAALG 641
Query: 378 WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTF 500
P Y + ++ +V K+A + + +Y TF
Sbjct: 642 SRPHLEQYVDSKVDEW-VGQVTKLALFAVSQPQASYAAYTF 681
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,006,563
Number of Sequences: 59808
Number of extensions: 419927
Number of successful extensions: 1310
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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