Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120518.Seq
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 31 0.010
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 31 0.010
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.65
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.65
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 3.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 6.0
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 8.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.010
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 VVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 413
V P++ VK LQV + ++YK +++ F +E+G +G I Y
Sbjct: 28 VAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87
Query: 414 LCKFGFYEVFKVAYAGMLDDETAYTYRTFV 503
F F + +K + G +D T + R FV
Sbjct: 88 ALNFAFKDKYKQVFLGGVDKNTQF-LRYFV 116
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.010
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 VVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 413
V P++ VK LQV + ++YK +++ F +E+G +G I Y
Sbjct: 28 VAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87
Query: 414 LCKFGFYEVFKVAYAGMLDDETAYTYRTFV 503
F F + +K + G +D T + R FV
Sbjct: 88 ALNFAFKDKYKQVFLGGVDKNTQF-LRYFV 116
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.0 bits (52), Expect = 0.65
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 278 HQVEGHHGVWVRPHDRTPPTPQRAKYLGDP 189
HQ + H+G V+ +T Q+++ GDP
Sbjct: 22 HQHQQHYGAAVQVPQQTQSVQQQSQQAGDP 51
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.65
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 481 PTLTVPSCTCGVCVGGIHRRHRPVAHGGG*GPYPKPCLVSRA 606
P T+ C VC+ RRHRPV G Y C + RA
Sbjct: 97 PNSTIAVC---VCMRKCPRRHRPVCASNG-KIYANHCELHRA 134
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 173 RSPVNLDRLNISLFEELVVFC 235
R+P NL +N+++ + L++FC
Sbjct: 50 RTPSNLFVINLAISDFLMMFC 70
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 173 RSPVNLDRLNISLFEELVVFC 235
R+P NL +N+++ L++FC
Sbjct: 84 RTPSNLFVINLAISNFLMMFC 104
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 86 GPRNGEFRAASSNEEN 39
GPRNG+ + SS EN
Sbjct: 210 GPRNGKRKRKSSTIEN 225
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 463 CWTTRPPTLTVPSCTCGVCVGGIHRRHRP 549
CW+ R C C G + RR++P
Sbjct: 392 CWS-RDFRRAFVRILCACCPGRVRRRYQP 419
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1
Query: 281 LHQVEGHHGVWVRPHDRTPPTPQRA 207
L EG G+W + PP P A
Sbjct: 943 LQYKEGDAGIWQQQEFTGPPLPYAA 967
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1
Query: 281 LHQVEGHHGVWVRPHDRTPPTPQRA 207
L EG G+W + PP P A
Sbjct: 939 LQYKEGDAGIWQQQEFTGPPLPYAA 963
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,139
Number of Sequences: 438
Number of extensions: 3854
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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