Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120513.Seq
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 85 6e-17
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 34 0.082
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 33 0.14
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 33 0.19
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 0.57
SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8) 29 3.1
SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_1274| Best HMM Match : PARG_cat (HMM E-Value=2.5e-14) 27 9.4
SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35) 27 9.4
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 146 bits (355), Expect = 1e-35
Identities = 64/83 (77%), Positives = 77/83 (92%)
Frame = +1
Query: 259 KTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAG 438
KTGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFDYKTC+V+ A++QQSP+IA G
Sbjct: 5 KTGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDIAQG 64
Query: 439 VHENRNDEEVGAGDQGLMFGYAT 507
VH R+DE++GAGDQGLMFGYAT
Sbjct: 65 VHIGRSDEDLGAGDQGLMFGYAT 87
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 483 GLDVRLCNSETEECMPLTVVLAHKLNPKIAELRRNG 590
GL ET+E MPLTVVLAH LN ++A+ RRNG
Sbjct: 80 GLMFGYATDETDELMPLTVVLAHGLNKRLADCRRNG 115
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 137 bits (332), Expect = 6e-33
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +1
Query: 259 KTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAG 438
KTGM+LLCGEITS A VDYQ VVR+ +K IGYDDS KGFDYKTC+V++AL+QQS +IA G
Sbjct: 74 KTGMILLCGEITSNAVVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHG 133
Query: 439 VHENRNDEEVGAGDQGLMFGYAT 507
VH R +E+VGAGDQGLMFGYAT
Sbjct: 134 VHVGREEEDVGAGDQGLMFGYAT 156
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +2
Query: 125 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACET K
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAK 74
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 483 GLDVRLCNSETEECMPLTVVLAHKLNPKIAELRRNG 590
GL ETEE MPLTVVLAHK+N K+AE RR+G
Sbjct: 149 GLMFGYATDETEELMPLTVVLAHKMNQKLAEYRRDG 184
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 130 bits (314), Expect = 9e-31
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 435
TKTG+VLL GEITS A VDYQ VVR T++ IGY+DSS GFDYKTCSV+LA+ +Q IA
Sbjct: 94 TKTGLVLLFGEITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQ 153
Query: 436 GVHENRNDEEVGAGDQGLMFGYAT 507
VH NR D+E+GAGDQGLMFGYAT
Sbjct: 154 TVHLNRRDDEIGAGDQGLMFGYAT 177
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/52 (75%), Positives = 40/52 (76%)
Frame = +2
Query: 107 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
Y D FLFTSESV EGH DKMCDQISDA+LDAHL QDP AKVACET K
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATK 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 483 GLDVRLCNSETEECMPLTVVLAHKLNPKIAELRR 584
GL ETEE MPLT VLAHKL ++AE R+
Sbjct: 170 GLMFGYATDETEELMPLTTVLAHKLCARLAECRK 203
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +2
Query: 125 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACE+ K
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAK 54
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 259 KTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 369
KTGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSK
Sbjct: 54 KTGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSK 90
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 125 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 247
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 460 EEVGAGDQGLMFGYAT 507
E+ GAGDQGLMFGYAT
Sbjct: 8 EDQGAGDQGLMFGYAT 23
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 483 GLDVRLCNSETEECMPLTVVLAHKLNPKIAELRRNG 590
GL +ET+ MP V AH+L + +ELRRNG
Sbjct: 16 GLMFGYATNETDSLMPAPVYYAHRLVERQSELRRNG 51
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 143
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 143
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 318 LIIHVSFGCDFATQ--KHHTGFSLVSHATFASGS*FRCASRIASLIWSHILSG 166
L H++F C + H S +S + A + FRC+ R S++W H+ +G
Sbjct: 263 LTCHLNFACRVCRTYPRLHVIPSSISDSDLAKVASFRCSGRFPSIVWRHMTNG 315
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 517 SVSLLHNRTSSPGLLPQLPRHFCSHAPQQQCLVIVGL 407
S++ L N T+ P + PQ P H SHA + ++I G+
Sbjct: 95 SLATLGNETARPAIAPQEPEHLVSHANKILTVIIQGM 131
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 283 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDYK 384
GEITS N+D +K+ + K I YD G+DY+
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8)
Length = 1392
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 480 PGLDVRLCNSETEECMPLTVVLAHKLNPKIAE 575
PG D R +S + PLT AHK +PK+++
Sbjct: 548 PGFDSRAGSSSGKLSKPLTKTKAHKQSPKVSK 579
>SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 155 GEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLKPVWCFCVAKSHPKL 304
G G D++ + +L A +N A T+ KPV + +A HP++
Sbjct: 391 GLGRLDRLVEAFVYTVLGAQVNVRSSIANAINTETKPVGAYNMAGGHPRV 440
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 56 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 232
MP G +K N + D D +L +S+ + D++C + I AHL QDPD
Sbjct: 196 MPYGGGKRGKSKKNSSTLDTGDLETWLKGRKSITRVRNHDELCAARALVIGMAHLTQDPD 255
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 56 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 232
MP + G +K N + D D +L S+ + D++C + I AHL +DPD
Sbjct: 241 MPFGAGKRGKSKKNSSTLDTGDLETWLKGKRSITRVRNHDELCAARATVIGMAHLTKDPD 300
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 610 WSCPQNSPFRLSSAIFGLSLCASTTVNGMHSSVSLLHN 497
W CP R S+ G LC S + NG+ S S ++
Sbjct: 355 WICPPVQSIRALSSSQGYDLCRSASGNGVSSIESAFYS 392
>SB_1274| Best HMM Match : PARG_cat (HMM E-Value=2.5e-14)
Length = 334
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 466 LPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSL-WTNHHN 350
L R FC +C+ I+G R S+ + W HH+
Sbjct: 106 LSRLFCERLDSNECVFIIGAQRFSNYTGYAHTFKWAGHHD 145
>SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35)
Length = 323
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 339 DRFAHNFLIIHVSFGCDFATQKHHTGFSLV 250
D F NF++I + CDF T K+ +G LV
Sbjct: 208 DSFITNFVVIVLLLSCDFWTVKNVSGRLLV 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,974,967
Number of Sequences: 59808
Number of extensions: 499887
Number of successful extensions: 1512
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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