Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120509.Seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.6  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 690 TDLRLPYWWRLIT 652
           T  +LPY+W+++T
Sbjct: 104 TPFKLPYFWKMLT 116


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -2

Query: 361 IFLMGASFFRWSSTAVFKPGSTGIFFINF 275
           +FLMG   F W         S G+F   F
Sbjct: 785 VFLMGYQIFDWVQKEQSLAHSVGVFLTIF 813



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   VTPRKRKLLSELRKTK--CTLASLKKSAKLIDNLSSEFLKEIVTSALIN 141
           V  + R+    L KTK  CTL +      L   +  E L E  TS LIN
Sbjct: 389 VNLKYRETYFRLSKTKTFCTLVTALVYCSLAIFVLCELLIEGTTSILIN 437


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 501 SSCTRYW 521
           +SCTRYW
Sbjct: 110 TSCTRYW 116


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 650 IVDKT*NPELVISLI 606
           IVDK  NP+L +SL+
Sbjct: 376 IVDKLLNPDLGLSLL 390


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 458 YGYERKDELANHALVFMYKVLGEKLNNRWHSIS*EAQY 571
           Y  + +DE  NH     Y   G KL + + S+  ++ Y
Sbjct: 334 YLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVY 371


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 458 YGYERKDELANHALVFMYKVLGEKLNNRWHSIS*EAQY 571
           Y  + +DE  NH     Y   G KL + + S+  ++ Y
Sbjct: 226 YLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVY 263


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 503 RLRHDLLAHLSSHIHNR*TLPLYLWFAI 420
           R+R  ++ +LSS    +  LP Y W  +
Sbjct: 175 RMRQHVMHNLSSVPQPQPVLPTYKWMQV 202


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 503 RLRHDLLAHLSSHIHNR*TLPLYLWFAI 420
           R+R  ++ +LSS    +  LP Y W  +
Sbjct: 175 RMRQHVMHNLSSVPQPQPVLPTYKWMQV 202


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 503 RLRHDLLAHLSSHIHNR*TLPLYLWFAI 420
           R+R  ++ +LSS    +  LP Y W  +
Sbjct: 175 RMRQHVMHNLSSVPQPQPVLPTYKWMQV 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,401
Number of Sequences: 336
Number of extensions: 3103
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)