Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120509.Seq
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 206 SSVHQKLTDICDISHHSEYQNIAKINEKN 292
           S  +QKLT I  IS+ +EY  + +  + N
Sbjct: 408 SDDNQKLTGIVQISNMTEYNGLTEPKKDN 436


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -3

Query: 312 LNLAQQVFFSLIFAMF*YSEW 250
           +++  ++FF ++FA F  + W
Sbjct: 415 IDVISRIFFPIVFAFFNLAYW 435


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -3

Query: 312 LNLAQQVFFSLIFAMF*YSEW 250
           +++  ++FF ++FA F  + W
Sbjct: 415 IDVISRIFFPIVFAFFNLAYW 435


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 59  ANVHFVFLNSLKSFLFRG 6
           A+VH+ +L+ L + LF+G
Sbjct: 213 ASVHYHYLSPLSAGLFQG 230


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 59  ANVHFVFLNSLKSFLFRG 6
           A+VH+ +L+ L + LF+G
Sbjct: 84  ASVHYHYLSPLSAGLFQG 101


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 59  ANVHFVFLNSLKSFLFRG 6
           A+VH+ +L+ L + LF+G
Sbjct: 213 ASVHYHYLSPLSAGLFQG 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,817
Number of Sequences: 438
Number of extensions: 3157
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)