Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120507.Seq
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1020 + 23344657-23346969                                         28   8.5  
04_01_0146 + 1701744-1701860,1702036-1702112,1702247-1702344,170...    28   8.5  

>07_03_1020 + 23344657-23346969
          Length = 770

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 450 LVSTGVYPVNPKEASFNDCQAIPILGVWKPSCV 352
           ++ +G++P NP   SFND     +   WK  CV
Sbjct: 163 VIDSGIWPENP---SFNDSGLAAVRRSWKGGCV 192


>04_01_0146 +
           1701744-1701860,1702036-1702112,1702247-1702344,
           1704073-1704228,1704671-1705290,1705397-1705458,
           1705551-1705941,1706404-1706575,1706686-1707212
          Length = 739

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 450 LVSTGVYPVNPKEASFNDCQAIPILGVWKPSCVLG 346
           ++ TG++P   + ASF+D    PI   WK  C  G
Sbjct: 146 IIDTGIWP---ESASFSDHGLSPIPSKWKGQCQAG 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,350,519
Number of Sequences: 37544
Number of extensions: 307534
Number of successful extensions: 481
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)