Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120504.Seq
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009797-1|AAH09797.1|  335|Homo sapiens GATA1 protein protein.        35   0.32 
X17254-1|CAA35120.1|  413|Homo sapiens protein ( Human mRNA for ...    31   3.0  
M30601-1|AAA35885.1|  413|Homo sapiens protein ( Human erythroid...    31   3.0  

>BC009797-1|AAH09797.1|  335|Homo sapiens GATA1 protein protein.
          Length = 335

 Score = 34.7 bits (76), Expect = 0.32
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -3

Query: 300 PLLSPEKNLLVAILLCCQYVGIYTMANTEWRRNRSVSRAPFVSVEGIDYKCGQQH 136
           PL+ P+K L+V+     Q     T   T WRRN   S  P  +  G+ YK   QH
Sbjct: 240 PLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRN--ASGDPVCNACGLYYKLHHQH 292


>X17254-1|CAA35120.1|  413|Homo sapiens protein ( Human mRNA for the
           transcription factor Eryf1. ).
          Length = 413

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -3

Query: 300 PLLSPEKNLLVAILLCCQYVGIYTMANTEWRRNRSVSRAPFVSVEGIDYKCGQ 142
           PL+ P+K L+V+     Q     T   T WRRN   S  P  +  G+ YK  Q
Sbjct: 240 PLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRN--ASGDPVCNACGLYYKLHQ 290


>M30601-1|AAA35885.1|  413|Homo sapiens protein ( Human erythroid
           DNA-binding protein (GF-1) mRNA, complete cds. ).
          Length = 413

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -3

Query: 300 PLLSPEKNLLVAILLCCQYVGIYTMANTEWRRNRSVSRAPFVSVEGIDYKCGQ 142
           PL+ P+K L+V+     Q     T   T WRRN   S  P  +  G+ YK  Q
Sbjct: 240 PLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRN--ASGDPVCNACGLYYKLHQ 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,886,553
Number of Sequences: 237096
Number of extensions: 1998328
Number of successful extensions: 4265
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4257
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)