Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120502.Seq
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.4  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        25   2.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.5  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 500 VANQIWRKQPIAHFVCQRNDCGSTRR*NGSAR 595
           ++  +WR+    H++C  N CG   + NG  R
Sbjct: 126 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 155


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 243 IQHHLQIAWQSRATRCICTHTQC 311
           + HH Q+  Q R   C C + +C
Sbjct: 425 LHHHQQVHNQQRILYCFCRNVEC 447


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 570  RDAETARQDCENARRETAQL 629
            RDA++  + CE A+R TAQL
Sbjct: 1051 RDADSWSRICEGAKRITAQL 1070


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 VMSTVCGCKYSGSPCFATLSGDGAGFGRHAQT 223
           ++ T+  C+ +G+  FAT SGDG G G    T
Sbjct: 13  LLITLVRCQQNGTFTFAT-SGDGGGGGGATDT 43


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 481 SDAKIDGGQPDLAEATDRSFC 543
           S+A I  G P  AEATDR +C
Sbjct: 787 SEAIIRYGAPIWAEATDRQWC 807


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 627 LANRMADIAQDVIAKPSNPQ 686
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 570  RDAETARQDCENARRETAQLANRMAD 647
            RDAE+  + CE A+R TA L     D
Sbjct: 988  RDAESWSRICEAAKRITASLQQAWDD 1013



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 200  RRRQVQIDV*ACRPNPAPSPDSVAKQGD 283
            R RQ ++      P+P PSP + A++ D
Sbjct: 1056 RARQRELQRAGRPPSPPPSPRTAARRAD 1083


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 599 RKRAPRNGAAGQPHGGHCARRDSQTQQPAAVPQ 697
           R+R+PR+G          ARR S++ +P + P+
Sbjct: 258 RRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPR 290


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -1

Query: 592 CRAVSASRRAT-IISLANKMSDRL--LPPNLVGHR-QFLRQIVNFGNNII 455
           CR    SR    + + A+++++ L  L PN  G + +  RQ++N GN+II
Sbjct: 734 CRKQHHSRHLERVANKASRITNALTCLMPNKRGPKSRSRRQLINVGNSII 783


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 459 SFVSISTAGAYLPVHST*GMTSSKSHSCNSMA*GNL 352
           S   + TA A +PV S   ++++ S SC+S A G+L
Sbjct: 223 SLSPVHTAPA-IPVSSCSPLSTASSASCSSSAAGSL 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,705
Number of Sequences: 2352
Number of extensions: 18198
Number of successful extensions: 43
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)