Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120501.Seq
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog pr...    76   6e-14
BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p pro...    76   6e-14
AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA...    76   6e-14
AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p pro...    29   9.1  
AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA ...    29   9.1  

>U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog
           protein.
          Length = 770

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = -1

Query: 509 VFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCVYLCIDRCGQLY 330
           ++I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+YLC+D CG  Y
Sbjct: 253 LYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCLYLCMDACGVPY 311

Query: 329 GSKTLSDDCFMREIMEKNNYNTY 261
           GSK  +DDC   E M   NYNTY
Sbjct: 312 GSKDFTDDCVFNENMGLQNYNTY 334



 Score = 35.5 bits (78), Expect = 0.079
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 246 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 154
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p
           protein.
          Length = 760

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = -1

Query: 509 VFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCVYLCIDRCGQLY 330
           ++I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+YLC+D CG  Y
Sbjct: 253 LYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCLYLCMDACGVPY 311

Query: 329 GSKTLSDDCFMREIMEKNNYNTY 261
           GSK  +DDC   E M   NYNTY
Sbjct: 312 GSKDFTDDCVFNENMGLQNYNTY 334



 Score = 35.5 bits (78), Expect = 0.079
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 246 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 154
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA
           protein.
          Length = 770

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = -1

Query: 509 VFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCVYLCIDRCGQLY 330
           ++I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+YLC+D CG  Y
Sbjct: 253 LYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCLYLCMDACGVPY 311

Query: 329 GSKTLSDDCFMREIMEKNNYNTY 261
           GSK  +DDC   E M   NYNTY
Sbjct: 312 GSKDFTDDCVFNENMGLQNYNTY 334



 Score = 35.5 bits (78), Expect = 0.079
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 246 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 154
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 393 HRHSKRHYVCVPVHRPVWPTV 331
           HRHS RHY+     RPV PTV
Sbjct: 507 HRHSPRHYIA--DQRPVGPTV 525


>AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 393 HRHSKRHYVCVPVHRPVWPTV 331
           HRHS RHY+     RPV PTV
Sbjct: 507 HRHSPRHYIA--DQRPVGPTV 525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,672,053
Number of Sequences: 53049
Number of extensions: 699986
Number of successful extensions: 1647
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)